Cow genome map
Conread name: | Ss1.1-Pig3-SRG8002H01.5 |
Conread position: | 1042-1331 |
Cow position: | chr11:23047889-23047592 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 204 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 26, 145 |
Conread position: | 1044-1293 |
Cow position: | chr11:67174581-67174841 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 189 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 31, 212 |
Conread position: | 1044-1324 |
Cow position: | chr11:38794411-38794697 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 199 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 81, 24 |
Conread position: | 1047-1330 |
Cow position: | chr11:66265462-66265745 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 195 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 13, 91 |
Conread position: | 1047-1333 |
Cow position: | chr11:11460354-11460645 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 200 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 13, 188 |
Conread position: | 1057-1306 |
Cow position: | chr11:7683839-7684104 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 195 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 39, 16 |
Conread position: | 1057-1311 |
Cow position: | chr11:1668550-1668818 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 193 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 26, 196 |
Conread position: | 1057-1318 |
Cow position: | chr11:29802697-29802435 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 189 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 22, 124 |
Conread position: | 1058-1302 |
Cow position: | chr11:14941714-14941467 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 192 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 22, 46 |
Conread position: | 1059-1318 |
Cow position: | chr11:37372185-37372470 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 198 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 1059-1326 |
Cow position: | chr11:40486060-40485792 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 196 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 24, 15 |
Conread position: | 1059-1330 |
Cow position: | chr11:52832839-52832555 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 215 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 61, 252 |
Conread position: | 1059-1331 |
Cow position: | chr11:46705653-46705366 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 201 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 24, 110 |
Conread position: | 1059-1331 |
Cow position: | chr11:54244568-54244845 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 200 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 24, 32 |
Conread position: | 1059-1343 |
Cow position: | chr11:47193395-47193699 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 221 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 24, 144 |
Conread position: | 1065-1321 |
Cow position: | chr11:27681408-27681663 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 180 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 194, 11 |
Conread position: | 1065-1360 |
Cow position: | chr11:14308546-14308841 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 199 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 266, 11 |
Conread position: | 1066-1364 |
Cow position: | chr11:2394178-2393886 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 208 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 31, 15 |
Conread position: | 1068-1330 |
Cow position: | chr11:26468059-26468317 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 186 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 185, 8 |
Conread position: | 1069-1329 |
Cow position: | chr11:63157022-63156754 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 198 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 6, 187 |
Conread position: | 1069-1342 |
Cow position: | chr11:19269188-19268908 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 200 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 9, 113 |
Conread position: | 1076-1332 |
Cow position: | chr11:43646495-43646234 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 186 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 9, 17 |
Conread position: | 1078-1354 |
Cow position: | chr11:45889861-45890157 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 205 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 54, 75 |
Conread position: | 1081-1323 |
Cow position: | chr11:44655738-44655504 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 173 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 148, 43 |
Conread position: | 1093-1308 |
Cow position: | chr11:75255341-75255554 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 153 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 52, 34 |
Conread position: | 1108-1311 |
Cow position: | chr11:31422679-31422883 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 154 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 143, 20 |
Conread position: | 1111-1310 |
Cow position: | chr11:50951507-50951706 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 156 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 17, 9 |
Conread position: | 1120-1328 |
Cow position: | chr11:65988186-65988390 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 146 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 11, 62 |
Conread position: | 1121-1321 |
Cow position: | chr11:52402425-52402625 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 143 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 139, 5 |
Conread position: | 1121-1327 |
Cow position: | chr11:19259552-19259343 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 149 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 89, 5 |
Conread position: | 1126-1318 |
Cow position: | chr11:14046111-14045920 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 138 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 95, 54 |
Conread position: | 1126-1321 |
Cow position: | chr11:8828663-8828470 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 147 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 133, 53 |
Conread position: | 1126-1321 |
Cow position: | chr11:34946106-34945909 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 137 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 133, 0 |
Conread position: | 1126-1322 |
Cow position: | chr11:5648711-5648902 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 144 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 136, 44 |
Conread position: | 1126-1324 |
Cow position: | chr11:9055926-9056122 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 148 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 123, 99 |
Conread position: | 1126-1329 |
Cow position: | chr11:11752552-11752345 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 150 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 1126-1329 |
Cow position: | chr11:81518207-81518010 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 142 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 123, 53 |
Conread position: | 1126-1331 |
Cow position: | chr11:18144851-18144651 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 144 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 85, 14 |
Conread position: | 1126-1332 |
Cow position: | chr11:32438986-32438778 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 163 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 127, 117 |
Conread position: | 1126-1338 |
Cow position: | chr11:69402283-69402070 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 155 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 135, 102 |
Conread position: | 1126-1360 |
Cow position: | chr11:24625810-24626038 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 167 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 135, 14 |
Conread position: | 1128-1331 |
Cow position: | chr11:53452378-53452177 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 146 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 126, 49 |
Conread position: | 1129-1321 |
Cow position: | chr11:19501937-19502130 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 146 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 128, 76 |
Conread position: | 1130-1321 |
Cow position: | chr11:67871633-67871441 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 138 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 81, 19 |
Conread position: | 1130-1324 |
Cow position: | chr11:61427563-61427754 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 146 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 123, 81 |
Conread position: | 1130-1328 |
Cow position: | chr11:27722361-27722562 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 147 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 1130-1344 |
Cow position: | chr11:50937776-50937554 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 161 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 85, 17 |
Conread position: | 1130-1355 |
Cow position: | chr11:21136785-21137010 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 160 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 121, 40 |
Conread position: | 1130-1357 |
Cow position: | chr11:38845293-38845068 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 162 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 119, 96 |
Conread position: | 1130-1370 |
Cow position: | chr11:76392047-76391809 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 172 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 65, 14 |
Conread position: | 1131-1321 |
Cow position: | chr11:53445748-53445932 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 136 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1131-1331 |
Cow position: | chr11:40275631-40275429 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 156 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 1131-1331 |
Cow position: | chr11:40279123-40278921 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 156 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 1131-1344 |
Cow position: | chr11:13306858-13306638 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 150 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 1132-1324 |
Cow position: | chr11:84795778-84795587 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 137 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 119, 165 |
Conread position: | 1132-1329 |
Cow position: | chr11:41272109-41272308 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 150 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 79, 23 |
Conread position: | 1133-1327 |
Cow position: | chr11:20491544-20491732 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 143 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 126, 27 |
Conread position: | 1133-1330 |
Cow position: | chr11:58112954-58112758 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 146 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 115, 8 |
Conread position: | 1136-1324 |
Cow position: | chr11:7001955-7001764 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 134 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 1139-1327 |
Cow position: | chr11:50953585-50953395 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 145 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 1140-1273 |
Cow position: | chr11:8232470-8232336 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 109, 115 |
Conread position: | 1140-1321 |
Cow position: | chr11:11785311-11785495 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 142 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 1140-1328 |
Cow position: | chr11:9368807-9368995 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 145 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 43, 51 |
Conread position: | 1140-1328 |
Cow position: | chr11:19606297-19606481 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 149 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 70, 39 |
Conread position: | 1140-1331 |
Cow position: | chr11:16232958-16232762 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 142 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 1140-1336 |
Cow position: | chr11:44815485-44815681 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 139 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 108, 93 |
Conread position: | 1142-1331 |
Cow position: | chr11:34642248-34642058 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 140 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 117, 37 |
Conread position: | 1142-1339 |
Cow position: | chr11:47125530-47125722 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 144 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 80, 53 |
Conread position: | 1147-1329 |
Cow position: | chr11:65958714-65958530 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 141 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 115, 72 |
Conread position: | 1149-1343 |
Cow position: | chr11:696360-696168 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 141 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 111, 164 |
Conread position: | 1150-1315 |
Cow position: | chr11:56821254-56821086 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 122 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 1150-1333 |
Cow position: | chr11:44609554-44609736 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 142 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 111, 51 |
Conread position: | 1152-1308 |
Cow position: | chr11:77008033-77008185 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 100, 24 |
Conread position: | 1157-1331 |
Cow position: | chr11:6729665-6729839 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 102, 19 |
Conread position: | 1158-1354 |
Cow position: | chr11:29978340-29978140 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 142 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 53, 181 |
Conread position: | 1160-1324 |
Cow position: | chr11:40269596-40269433 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 123 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 50, 135 |
Conread position: | 1163-1331 |
Cow position: | chr11:40553842-40554009 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 125 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 94, 130 |
Conread position: | 1167-1327 |
Cow position: | chr11:373139-372976 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 120 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 1167-1331 |
Cow position: | chr11:34136508-34136674 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 119 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 1168-1331 |
Cow position: | chr11:56796523-56796357 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 125 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 1170-1324 |
Cow position: | chr11:32072154-32072308 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 118 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 54, 40 |
Conread position: | 1171-1324 |
Cow position: | chr11:49218338-49218182 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 120 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 1176-1329 |
Cow position: | chr11:41323251-41323094 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 123 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 13, 32 |
Conread position: | 1176-1330 |
Cow position: | chr11:22009372-22009215 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1182-1330 |
Cow position: | chr11:76856151-76856008 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 111 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 1187-1338 |
Cow position: | chr11:76851811-76851658 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 119 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 64, 151 |
Conread position: | 1200-1348 |
Cow position: | chr11:33191583-33191435 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 117 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 55, 118 |
Show alignments to all cow chromosomes.