Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8002H01.5
        

               Conread position:
               1042-1331
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               26, 145
               

               Conread position:
               1044-1293
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               31, 212
               

               Conread position:
               1044-1324
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               81, 24
               

               Conread position:
               1047-1330
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               13, 91
               

               Conread position:
               1047-1333
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 188
               

               Conread position:
               1057-1306
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               39, 16
               

               Conread position:
               1057-1311
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 196
               

               Conread position:
               1057-1318
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 124
               

               Conread position:
               1058-1302
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               1059-1318
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1059-1326
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               24, 15
               

               Conread position:
               1059-1330
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               61, 252
               

               Conread position:
               1059-1331
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 110
               

               Conread position:
               1059-1331
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               24, 32
               

               Conread position:
               1059-1343
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               24, 144
               

               Conread position:
               1065-1321
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               194, 11
               

               Conread position:
               1065-1360
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               266, 11
               

               Conread position:
               1066-1364
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               1068-1330
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               185, 8
               

               Conread position:
               1069-1329
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               6, 187
               

               Conread position:
               1069-1342
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               9, 113
               

               Conread position:
               1076-1332
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               1078-1354
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               1081-1323
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               148, 43
               

               Conread position:
               1093-1308
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 34
               

               Conread position:
               1108-1311
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               143, 20
               

               Conread position:
               1111-1310
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               1120-1328
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               1121-1321
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               139, 5
               

               Conread position:
               1121-1327
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               89, 5
               

               Conread position:
               1126-1318
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               95, 54
               

               Conread position:
               1126-1321
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               133, 53
               

               Conread position:
               1126-1321
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               1126-1322
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               136, 44
               

               Conread position:
               1126-1324
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               123, 99
               

               Conread position:
               1126-1329
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1126-1329
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               123, 53
               

               Conread position:
               1126-1331
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               85, 14
               

               Conread position:
               1126-1332
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               127, 117
               

               Conread position:
               1126-1338
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               135, 102
               

               Conread position:
               1126-1360
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               135, 14
               

               Conread position:
               1128-1331
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               126, 49
               

               Conread position:
               1129-1321
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               128, 76
               

               Conread position:
               1130-1321
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               81, 19
               

               Conread position:
               1130-1324
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               123, 81
               

               Conread position:
               1130-1328
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1130-1344
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               1130-1355
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               121, 40
               

               Conread position:
               1130-1357
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               119, 96
               

               Conread position:
               1130-1370
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               1131-1321
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1131-1331
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               1131-1331
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               1131-1344
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1132-1324
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               119, 165
               

               Conread position:
               1132-1329
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               79, 23
               

               Conread position:
               1133-1327
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               126, 27
               

               Conread position:
               1133-1330
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               115, 8
               

               Conread position:
               1136-1324
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1139-1327
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               1140-1273
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               109, 115
               

               Conread position:
               1140-1321
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               1140-1328
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               43, 51
               

               Conread position:
               1140-1328
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               70, 39
               

               Conread position:
               1140-1331
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1140-1336
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               108, 93
               

               Conread position:
               1142-1331
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               117, 37
               

               Conread position:
               1142-1339
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 53
               

               Conread position:
               1147-1329
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               115, 72
               

               Conread position:
               1149-1343
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               111, 164
               

               Conread position:
               1150-1315
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1150-1333
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               111, 51
               

               Conread position:
               1152-1308
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               100, 24
               

               Conread position:
               1157-1331
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               102, 19
               

               Conread position:
               1158-1354
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               53, 181
               

               Conread position:
               1160-1324
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 135
               

               Conread position:
               1163-1331
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               94, 130
               

               Conread position:
               1167-1327
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1167-1331
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1168-1331
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1170-1324
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 40
               

               Conread position:
               1171-1324
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1176-1329
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               1176-1330
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1182-1330
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1187-1338
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               64, 151
               

               Conread position:
               1200-1348
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               55, 118
               
Show alignments to all cow chromosomes.