Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8002H01.5
        

               Conread position:
               1047-1258
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               74, 24
               

               Conread position:
               1048-1317
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1048-1332
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               95, 43
               

               Conread position:
               1057-1315
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               79, 38
               

               Conread position:
               1057-1330
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               73, 24
               

               Conread position:
               1059-1266
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 108
               

               Conread position:
               1059-1359
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1062-1321
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1062-1329
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               57, 117
               

               Conread position:
               1064-1324
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1081-1324
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 153
               

               Conread position:
               1081-1334
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               1082-1324
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               1116-1330
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               144, 62
               

               Conread position:
               1120-1291
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               1120-1331
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               88, 6
               

               Conread position:
               1125-1321
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               132, 13
               

               Conread position:
               1125-1324
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               17, 62
               

               Conread position:
               1125-1332
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               1126-1266
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               1126-1308
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               1126-1321
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               127, 39
               

               Conread position:
               1126-1324
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               79, 143
               

               Conread position:
               1126-1324
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               131, 99
               

               Conread position:
               1126-1328
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               125, 144
               

               Conread position:
               1126-1332
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               123, 146
               

               Conread position:
               1126-1343
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               82, 182
               

               Conread position:
               1126-1351
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               125, 140
               

               Conread position:
               1126-1359
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               221, 126
               

               Conread position:
               1127-1321
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               1130-1306
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               122, 147
               

               Conread position:
               1132-1324
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1139-1287
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1139-1332
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               72, 97
               

               Conread position:
               1140-1323
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               119, 39
               

               Conread position:
               1140-1327
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               1140-1329
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               65, 39
               

               Conread position:
               1141-1326
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               127, 64
               

               Conread position:
               1142-1324
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1142-1330
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               1143-1321
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               68, 12
               

               Conread position:
               1144-1329
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               115, 34
               

               Conread position:
               1144-1331
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1144-1332
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               113, 31
               

               Conread position:
               1149-1331
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               112, 139
               

               Conread position:
               1151-1324
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               6, 124
               

               Conread position:
               1160-1356
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               9, 76
               

               Conread position:
               1169-1310
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1171-1366
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               86, 98
               

               Conread position:
               1172-1291
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1190-1358
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 20
               

               Conread position:
               1202-1328
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1205-1324
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1205-1338
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 0
               
Show alignments to all cow chromosomes.