Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8002H01.5
        

               Conread position:
               950-1293
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               155, 144
               

               Conread position:
               1047-1258
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 130
               

               Conread position:
               1053-1324
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 230
               

               Conread position:
               1057-1314
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               1057-1331
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               1059-1318
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               24, 85
               

               Conread position:
               1059-1320
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               76, 120
               

               Conread position:
               1059-1321
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               24, 151
               

               Conread position:
               1059-1332
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 98
               

               Conread position:
               1068-1318
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               107, 8
               

               Conread position:
               1076-1318
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               61, 31
               

               Conread position:
               1079-1333
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1093-1330
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 54
               

               Conread position:
               1099-1290
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               155, 29
               

               Conread position:
               1115-1318
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               30, 60
               

               Conread position:
               1120-1295
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               131, 6
               

               Conread position:
               1125-1308
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               1125-1330
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 102
               

               Conread position:
               1126-1290
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               1126-1308
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1126-1308
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               123, 77
               

               Conread position:
               1126-1321
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               132, 53
               

               Conread position:
               1126-1330
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               131, 52
               

               Conread position:
               1126-1331
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               131, 102
               

               Conread position:
               1126-1332
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               121, 66
               

               Conread position:
               1128-1311
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 14
               

               Conread position:
               1129-1299
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               120, 46
               

               Conread position:
               1130-1248
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1130-1265
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1130-1310
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               1130-1314
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               93, 27
               

               Conread position:
               1130-1318
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1130-1321
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               80, 163
               

               Conread position:
               1130-1326
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1130-1328
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               126, 35
               

               Conread position:
               1130-1333
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1130-1335
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               1130-1336
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               1131-1320
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               124, 40
               

               Conread position:
               1131-1340
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               79, 108
               

               Conread position:
               1132-1315
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               129, 72
               

               Conread position:
               1133-1315
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               128, 42
               

               Conread position:
               1140-1311
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               40, 141
               

               Conread position:
               1140-1312
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 16
               

               Conread position:
               1140-1329
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               71, 31
               

               Conread position:
               1141-1301
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               113, 49
               

               Conread position:
               1143-1308
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               1143-1329
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               68, 185
               

               Conread position:
               1144-1315
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               1150-1331
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1151-1356
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               97, 64
               

               Conread position:
               1163-1329
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1164-1314
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1171-1318
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               1176-1324
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1177-1331
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               1183-1330
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               1185-1331
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               1196-1318
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 0
               
Show alignments to all cow chromosomes.