Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8002H01.5
        

               Conread position:
               1046-1321
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               1048-1331
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               35, 203
               

               Conread position:
               1058-1344
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 161
               

               Conread position:
               1059-1335
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 166
               

               Conread position:
               1059-1362
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               79, 121
               

               Conread position:
               1060-1292
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               23, 227
               

               Conread position:
               1076-1273
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               81, 56
               

               Conread position:
               1076-1315
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 148
               

               Conread position:
               1078-1332
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               133, 17
               

               Conread position:
               1097-1338
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               24, 93
               

               Conread position:
               1107-1291
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               142, 20
               

               Conread position:
               1112-1290
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               1112-1290
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               1112-1333
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 71
               

               Conread position:
               1114-1315
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               1121-1291
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               138, 5
               

               Conread position:
               1121-1321
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               1125-1272
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               1125-1324
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               124, 54
               

               Conread position:
               1125-1329
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               80, 46
               

               Conread position:
               1125-1329
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               95, 46
               

               Conread position:
               1126-1330
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1126-1330
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               135, 56
               

               Conread position:
               1126-1332
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               67, 132
               

               Conread position:
               1126-1337
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1126-1356
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               84, 100
               

               Conread position:
               1128-1330
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               1130-1312
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               1130-1318
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               1130-1318
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1130-1324
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               80, 160
               

               Conread position:
               1130-1335
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               81, 159
               

               Conread position:
               1130-1338
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               123, 96
               

               Conread position:
               1131-1326
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1132-1343
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               119, 43
               

               Conread position:
               1135-1300
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               124, 46
               

               Conread position:
               1137-1333
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               7, 45
               

               Conread position:
               1139-1324
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               113, 21
               

               Conread position:
               1139-1333
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               72, 97
               

               Conread position:
               1140-1315
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               1140-1321
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               111, 80
               

               Conread position:
               1140-1321
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               114, 55
               

               Conread position:
               1142-1344
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               107, 153
               

               Conread position:
               1144-1319
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               113, 33
               

               Conread position:
               1145-1334
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 65
               

               Conread position:
               1146-1335
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 150
               

               Conread position:
               1155-1319
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1155-1324
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               56, 26
               

               Conread position:
               1155-1324
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 58
               

               Conread position:
               1163-1321
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               48, 66
               

               Conread position:
               1164-1333
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 124
               

               Conread position:
               1167-1321
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1180-1330
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               81, 0
               
Show alignments to all cow chromosomes.