Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002H01.5 |
| Conread position: | 1059-1318 |
| Cow position: | chr22:25476952-25477220 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 1059-1318 |
| Cow position: | chr22:33386617-33386337 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 256 |
| Conread position: | 1059-1324 |
| Cow position: | chr22:13057806-13057527 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1059-1330 |
| Cow position: | chr22:19738682-19738403 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 1059-1374 |
| Cow position: | chr22:45291228-45291556 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 31, 68 |
| Conread position: | 1067-1318 |
| Cow position: | chr22:4753844-4753583 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 54, 183 |
| Conread position: | 1076-1318 |
| Cow position: | chr22:13235448-13235697 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 1098-1338 |
| Cow position: | chr22:30573206-30572965 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 1111-1342 |
| Cow position: | chr22:44924092-44923860 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 128, 14 |
| Conread position: | 1120-1291 |
| Cow position: | chr22:22997449-22997623 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1120-1330 |
| Cow position: | chr22:11778634-11778425 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 88, 5 |
| Conread position: | 1121-1275 |
| Cow position: | chr22:15398603-15398447 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 130, 82 |
| Conread position: | 1125-1305 |
| Cow position: | chr22:4651155-4651340 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1126-1265 |
| Cow position: | chr22:39293764-39293623 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 125, 117 |
| Conread position: | 1126-1293 |
| Cow position: | chr22:19263153-19262980 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1126-1308 |
| Cow position: | chr22:2913259-2913440 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 126, 29 |
| Conread position: | 1126-1321 |
| Cow position: | chr22:7301856-7301665 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 125, 100 |
| Conread position: | 1126-1331 |
| Cow position: | chr22:39983217-39983010 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 1126-1335 |
| Cow position: | chr22:139321-139119 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 194, 122 |
| Conread position: | 1126-1338 |
| Cow position: | chr22:26057360-26057577 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 125, 59 |
| Conread position: | 1126-1366 |
| Cow position: | chr22:43352210-43351968 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 7, 179 |
| Conread position: | 1127-1315 |
| Cow position: | chr22:15358226-15358416 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 1130-1259 |
| Cow position: | chr22:23016974-23016846 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1130-1320 |
| Cow position: | chr22:41389091-41389282 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1130-1324 |
| Cow position: | chr22:7287493-7287691 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1132-1315 |
| Cow position: | chr22:27224113-27224297 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 75, 9 |
| Conread position: | 1132-1329 |
| Cow position: | chr22:30429604-30429806 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 102, 23 |
| Conread position: | 1132-1340 |
| Cow position: | chr22:876261-876476 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 136 |
| Conread position: | 1133-1324 |
| Cow position: | chr22:31192586-31192398 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 124, 46 |
| Conread position: | 1133-1327 |
| Cow position: | chr22:17184700-17184503 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1134-1324 |
| Cow position: | chr22:29441273-29441085 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 127, 45 |
| Conread position: | 1136-1314 |
| Cow position: | chr22:22999583-22999761 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 121, 92 |
| Conread position: | 1136-1315 |
| Cow position: | chr22:26941783-26941958 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 123, 43 |
| Conread position: | 1136-1321 |
| Cow position: | chr22:5927969-5927788 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1140-1329 |
| Cow position: | chr22:11878051-11877859 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 1140-1331 |
| Cow position: | chr22:9466607-9466793 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 109, 36 |
| Conread position: | 1140-1333 |
| Cow position: | chr22:42946055-42945866 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 70, 121 |
| Conread position: | 1141-1311 |
| Cow position: | chr22:5622721-5622557 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1141-1324 |
| Cow position: | chr22:23037752-23037566 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 30 |
| Conread position: | 1142-1311 |
| Cow position: | chr22:32690439-32690274 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 114, 18 |
| Conread position: | 1143-1333 |
| Cow position: | chr22:28685323-28685513 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 68, 42 |
| Conread position: | 1147-1293 |
| Cow position: | chr22:23270346-23270198 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1155-1324 |
| Cow position: | chr22:44468812-44468984 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 138 |
| Conread position: | 1157-1334 |
| Cow position: | chr22:31512792-31512618 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 96, 38 |
| Conread position: | 1158-1308 |
| Cow position: | chr22:37554502-37554353 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 99, 70 |
| Conread position: | 1163-1333 |
| Cow position: | chr22:43873073-43873247 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1164-1307 |
| Cow position: | chr22:17074387-17074532 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1164-1327 |
| Cow position: | chr22:8397811-8397643 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1167-1341 |
| Cow position: | chr22:22210217-22210049 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1168-1324 |
| Cow position: | chr22:19069110-19069264 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 83, 47 |
| Conread position: | 1171-1329 |
| Cow position: | chr22:27468927-27469089 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 157 |
| Conread position: | 1172-1324 |
| Cow position: | chr22:33066982-33067135 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 80, 146 |
| Conread position: | 1173-1307 |
| Cow position: | chr22:25168264-25168130 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 88 |
| Conread position: | 1186-1344 |
| Cow position: | chr22:33763443-33763287 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 73, 49 |
| Conread position: | 1190-1324 |
| Cow position: | chr22:17926236-17926103 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 81, 15 |
| Conread position: | 1192-1320 |
| Cow position: | chr22:30520941-30521071 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1203-1328 |
| Cow position: | chr22:17835193-17835320 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.