Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8002H01.5
        

               Conread position:
               1048-1319
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 79
               

               Conread position:
               1057-1320
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               1057-1332
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 146
               

               Conread position:
               1058-1311
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               73, 23
               

               Conread position:
               1059-1290
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               1069-1333
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               1072-1324
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               48, 36
               

               Conread position:
               1076-1303
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1076-1331
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1082-1324
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               1094-1318
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               27, 79
               

               Conread position:
               1111-1332
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               1119-1293
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               123, 144
               

               Conread position:
               1120-1321
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               176, 123
               

               Conread position:
               1121-1319
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               136, 174
               

               Conread position:
               1125-1324
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               132, 80
               

               Conread position:
               1126-1321
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               125, 43
               

               Conread position:
               1126-1327
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               1126-1330
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               127, 80
               

               Conread position:
               1126-1330
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               85, 27
               

               Conread position:
               1127-1324
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1130-1321
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               121, 30
               

               Conread position:
               1130-1326
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1130-1339
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               121, 55
               

               Conread position:
               1132-1324
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               78, 66
               

               Conread position:
               1132-1353
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 159
               

               Conread position:
               1133-1300
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               1133-1349
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               122, 40
               

               Conread position:
               1139-1292
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               112, 94
               

               Conread position:
               1140-1327
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               113, 42
               

               Conread position:
               1140-1330
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               50, 96
               

               Conread position:
               1142-1326
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1144-1339
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               104, 82
               

               Conread position:
               1150-1335
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               164, 37
               

               Conread position:
               1156-1332
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1171-1338
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 171
               

               Conread position:
               1181-1350
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 47
               

               Conread position:
               1192-1332
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 138
               
Show alignments to all cow chromosomes.