Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002H01.5 |
| Conread position: | 1048-1319 |
| Cow position: | chr23:30773793-30773521 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 79 |
| Conread position: | 1057-1320 |
| Cow position: | chr23:8930226-8929959 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 1057-1332 |
| Cow position: | chr23:26861345-26861624 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 146 |
| Conread position: | 1058-1311 |
| Cow position: | chr23:28721318-28721066 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 1059-1290 |
| Cow position: | chr23:16072429-16072193 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 1069-1333 |
| Cow position: | chr23:26067019-26067285 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 1072-1324 |
| Cow position: | chr23:28700911-28701172 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 1076-1303 |
| Cow position: | chr23:40651549-40651308 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1076-1331 |
| Cow position: | chr23:37224153-37223881 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1082-1324 |
| Cow position: | chr23:38941562-38941806 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 1094-1318 |
| Cow position: | chr23:4955972-4956198 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 27, 79 |
| Conread position: | 1111-1332 |
| Cow position: | chr23:36082553-36082781 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 1119-1293 |
| Cow position: | chr23:40862324-40862498 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 123, 144 |
| Conread position: | 1120-1321 |
| Cow position: | chr23:40526004-40525808 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 176, 123 |
| Conread position: | 1121-1319 |
| Cow position: | chr23:29272095-29272290 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 136, 174 |
| Conread position: | 1125-1324 |
| Cow position: | chr23:5389685-5389885 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 132, 80 |
| Conread position: | 1126-1321 |
| Cow position: | chr23:26217550-26217737 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 125, 43 |
| Conread position: | 1126-1327 |
| Cow position: | chr23:21847739-21847943 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1126-1330 |
| Cow position: | chr23:21866727-21866932 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 127, 80 |
| Conread position: | 1126-1330 |
| Cow position: | chr23:35177305-35177512 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 85, 27 |
| Conread position: | 1127-1324 |
| Cow position: | chr23:22272493-22272290 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1130-1321 |
| Cow position: | chr23:18326798-18326986 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 30 |
| Conread position: | 1130-1326 |
| Cow position: | chr23:35362788-35362605 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1130-1339 |
| Cow position: | chr23:13359816-13360024 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 121, 55 |
| Conread position: | 1132-1324 |
| Cow position: | chr23:35155366-35155559 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 78, 66 |
| Conread position: | 1132-1353 |
| Cow position: | chr23:21276030-21275803 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 159 |
| Conread position: | 1133-1300 |
| Cow position: | chr23:17092505-17092334 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 1133-1349 |
| Cow position: | chr23:7611260-7611469 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 122, 40 |
| Conread position: | 1139-1292 |
| Cow position: | chr23:17000705-17000858 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 112, 94 |
| Conread position: | 1140-1327 |
| Cow position: | chr23:14840512-14840329 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 113, 42 |
| Conread position: | 1140-1330 |
| Cow position: | chr23:15872695-15872503 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 96 |
| Conread position: | 1142-1326 |
| Cow position: | chr23:40891363-40891550 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1144-1339 |
| Cow position: | chr23:347742-347552 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 104, 82 |
| Conread position: | 1150-1335 |
| Cow position: | chr23:12366459-12366274 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 164, 37 |
| Conread position: | 1156-1332 |
| Cow position: | chr23:33927822-33928002 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1171-1338 |
| Cow position: | chr23:24411035-24411209 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 171 |
| Conread position: | 1181-1350 |
| Cow position: | chr23:30736107-30735939 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 70, 47 |
| Conread position: | 1192-1332 |
| Cow position: | chr23:37651987-37651844 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 138 |
Show alignments to all cow chromosomes.