Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8002H01.5
        

               Conread position:
               1047-1245
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 129
               

               Conread position:
               1047-1324
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               13, 85
               

               Conread position:
               1056-1324
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               36, 13
               

               Conread position:
               1058-1321
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1059-1324
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1059-1328
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               24, 257
               

               Conread position:
               1059-1331
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               1060-1304
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1061-1343
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               1064-1302
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               19, 109
               

               Conread position:
               1098-1314
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               30, 70
               

               Conread position:
               1108-1333
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 125
               

               Conread position:
               1125-1324
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               85, 169
               

               Conread position:
               1126-1289
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               125, 53
               

               Conread position:
               1126-1320
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               133, 42
               

               Conread position:
               1126-1330
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 24
               

               Conread position:
               1126-1349
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               82, 159
               

               Conread position:
               1130-1284
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               1130-1310
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               1130-1318
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               128, 90
               

               Conread position:
               1130-1321
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               155
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1130-1332
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               80, 25
               

               Conread position:
               1132-1315
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1133-1328
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               116, 143
               

               Conread position:
               1136-1292
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1139-1329
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 36
               

               Conread position:
               1140-1326
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               113, 67
               

               Conread position:
               1141-1312
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               110, 137
               

               Conread position:
               1144-1335
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 41
               

               Conread position:
               1145-1324
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               114, 34
               

               Conread position:
               1170-1308
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1172-1321
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1179-1318
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1198-1308
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               1206-1340
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               56, 0
               
Show alignments to all cow chromosomes.