Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002H01.5 |
| Conread position: | 1047-1245 |
| Cow position: | chr24:27683582-27683379 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 129 |
| Conread position: | 1047-1324 |
| Cow position: | chr24:28279499-28279781 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 13, 85 |
| Conread position: | 1056-1324 |
| Cow position: | chr24:7079659-7079941 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 1058-1321 |
| Cow position: | chr24:16055631-16055356 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1059-1324 |
| Cow position: | chr24:44074562-44074301 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1059-1328 |
| Cow position: | chr24:31258467-31258177 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 257 |
| Conread position: | 1059-1331 |
| Cow position: | chr24:42943241-42942954 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 24, 63 |
| Conread position: | 1060-1304 |
| Cow position: | chr24:1438403-1438131 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1061-1343 |
| Cow position: | chr24:39742699-39742994 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 1064-1302 |
| Cow position: | chr24:25677912-25678160 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 1098-1314 |
| Cow position: | chr24:15617540-15617327 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 1108-1333 |
| Cow position: | chr24:2143682-2143913 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 125 |
| Conread position: | 1125-1324 |
| Cow position: | chr24:6427662-6427861 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 85, 169 |
| Conread position: | 1126-1289 |
| Cow position: | chr24:39681814-39681973 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 125, 53 |
| Conread position: | 1126-1320 |
| Cow position: | chr24:6507808-6507616 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 133, 42 |
| Conread position: | 1126-1330 |
| Cow position: | chr24:22888551-22888757 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 1126-1349 |
| Cow position: | chr24:27054369-27054590 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 82, 159 |
| Conread position: | 1130-1284 |
| Cow position: | chr24:35827700-35827855 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 1130-1310 |
| Cow position: | chr24:25164996-25165179 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1130-1318 |
| Cow position: | chr24:30860599-30860786 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 128, 90 |
| Conread position: | 1130-1321 |
| Cow position: | chr24:34369044-34368852 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 155 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1130-1332 |
| Cow position: | chr24:39350253-39350059 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 1132-1315 |
| Cow position: | chr24:28349540-28349732 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 1133-1328 |
| Cow position: | chr24:28335597-28335400 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 116, 143 |
| Conread position: | 1136-1292 |
| Cow position: | chr24:14617626-14617786 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1139-1329 |
| Cow position: | chr24:40809390-40809203 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 36 |
| Conread position: | 1140-1326 |
| Cow position: | chr24:14337707-14337888 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 113, 67 |
| Conread position: | 1141-1312 |
| Cow position: | chr24:26455815-26455987 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 110, 137 |
| Conread position: | 1144-1335 |
| Cow position: | chr24:22939669-22939862 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 105, 41 |
| Conread position: | 1145-1324 |
| Cow position: | chr24:36497754-36497578 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 114, 34 |
| Conread position: | 1170-1308 |
| Cow position: | chr24:44929350-44929491 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1172-1321 |
| Cow position: | chr24:41332579-41332428 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1179-1318 |
| Cow position: | chr24:15909631-15909773 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1198-1308 |
| Cow position: | chr24:6940744-6940855 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 1206-1340 |
| Cow position: | chr24:40611286-40611421 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.