Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8002H01.5
        

               Conread position:
               1047-1318
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               36, 63
               

               Conread position:
               1047-1334
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 53
               

               Conread position:
               1048-1326
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 49
               

               Conread position:
               1057-1321
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1059-1331
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1059-1337
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               192, 17
               

               Conread position:
               1061-1329
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               1062-1291
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               1076-1290
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               1076-1331
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 111
               

               Conread position:
               1111-1337
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               143, 15
               

               Conread position:
               1120-1321
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               15, 61
               

               Conread position:
               1120-1331
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               85, 99
               

               Conread position:
               1123-1327
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1126-1301
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 63
               

               Conread position:
               1126-1307
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               1126-1324
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               125, 93
               

               Conread position:
               1126-1331
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               135, 93
               

               Conread position:
               1126-1331
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               133, 199
               

               Conread position:
               1130-1318
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1130-1327
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 28
               

               Conread position:
               1130-1334
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               129, 48
               

               Conread position:
               1131-1327
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               1131-1330
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1132-1324
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               1136-1310
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1136-1318
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               113, 43
               

               Conread position:
               1136-1332
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 31
               

               Conread position:
               1138-1312
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1138-1329
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               72, 25
               

               Conread position:
               1139-1313
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               120, 149
               

               Conread position:
               1139-1326
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               50, 157
               

               Conread position:
               1140-1287
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1140-1344
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               1141-1342
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               69, 14
               

               Conread position:
               1144-1349
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               77, 48
               

               Conread position:
               1145-1314
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               1168-1308
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               93, 60
               

               Conread position:
               1172-1314
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               1176-1321
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               75, 96
               

               Conread position:
               1223-1335
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 0
               
Show alignments to all cow chromosomes.