Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002H01.5 |
| Conread position: | 1043-1330 |
| Cow position: | chr26:7955773-7956053 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 1053-1311 |
| Cow position: | chr26:12580087-12579827 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 106 |
| Conread position: | 1057-1318 |
| Cow position: | chr26:12652307-12652051 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 37, 73 |
| Conread position: | 1058-1314 |
| Cow position: | chr26:2389142-2388884 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 123 |
| Conread position: | 1059-1318 |
| Cow position: | chr26:6470361-6470082 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 14 |
| Conread position: | 1076-1237 |
| Cow position: | chr26:7103102-7102935 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 1076-1330 |
| Cow position: | chr26:12216799-12217050 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 45, 104 |
| Conread position: | 1111-1318 |
| Cow position: | chr26:10523462-10523260 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 150, 68 |
| Conread position: | 1118-1293 |
| Cow position: | chr26:3019422-3019249 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 133, 8 |
| Conread position: | 1125-1315 |
| Cow position: | chr26:21859822-21860011 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 85, 136 |
| Conread position: | 1126-1299 |
| Cow position: | chr26:19903381-19903554 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 133, 45 |
| Conread position: | 1126-1318 |
| Cow position: | chr26:9632369-9632171 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 167 |
| Conread position: | 1126-1318 |
| Cow position: | chr26:14080706-14080896 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 133, 93 |
| Conread position: | 1126-1318 |
| Cow position: | chr26:16604286-16604485 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 1126-1326 |
| Cow position: | chr26:2196592-2196390 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 81, 45 |
| Conread position: | 1130-1308 |
| Cow position: | chr26:7162408-7162228 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 81, 114 |
| Conread position: | 1130-1321 |
| Cow position: | chr26:10137737-10137546 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 121, 109 |
| Conread position: | 1130-1324 |
| Cow position: | chr26:12520031-12520227 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 1130-1330 |
| Cow position: | chr26:9064347-9064540 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 83, 10 |
| Conread position: | 1130-1342 |
| Cow position: | chr26:14924489-14924700 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 118, 51 |
| Conread position: | 1131-1308 |
| Cow position: | chr26:19110917-19111095 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1132-1258 |
| Cow position: | chr26:31466687-31466813 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1133-1314 |
| Cow position: | chr26:5783426-5783601 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 1136-1324 |
| Cow position: | chr26:3186556-3186747 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1139-1313 |
| Cow position: | chr26:3756239-3756405 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1140-1328 |
| Cow position: | chr26:32865879-32865687 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 39 |
| Conread position: | 1140-1338 |
| Cow position: | chr26:12669213-12669411 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 106, 100 |
| Conread position: | 1141-1339 |
| Cow position: | chr26:9102095-9101897 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 70, 93 |
| Conread position: | 1142-1291 |
| Cow position: | chr26:19768791-19768639 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1155-1338 |
| Cow position: | chr26:13018361-13018169 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1165-1331 |
| Cow position: | chr26:19332966-19332800 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 1168-1332 |
| Cow position: | chr26:10292817-10292983 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 88, 43 |
| Conread position: | 1172-1321 |
| Cow position: | chr26:6299469-6299615 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 87, 21 |
Show alignments to all cow chromosomes.