Cow genome map

Conread name: Ss1.1-Pig3-SRG8002H01.5

Conread position: 1057-1332
Cow position: chr27:21578530-21578811 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 64, 40

Conread position: 1058-1283
Cow position: chr27:13977505-13977731 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 18

Conread position: 1058-1315
Cow position: chr27:13005904-13005632 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 1058-1329
Cow position: chr27:6884083-6883806 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 14

Conread position: 1059-1338
Cow position: chr27:26440998-26441288 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 24, 129

Conread position: 1064-1324
Cow position: chr27:23662550-23662819 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 19, 116

Conread position: 1081-1293
Cow position: chr27:24333609-24333812 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 129, 56

Conread position: 1111-1335
Cow position: chr27:14937442-14937666 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 150, 15

Conread position: 1120-1331
Cow position: chr27:24224920-24225129 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 131, 32

Conread position: 1125-1329
Cow position: chr27:13958369-13958575 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 132, 172

Conread position: 1126-1331
Cow position: chr27:2354796-2354995 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 147, 123

Conread position: 1126-1331
Cow position: chr27:27053268-27053072 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 135, 62

Conread position: 1126-1333
Cow position: chr27:6454182-6453972 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 85, 113

Conread position: 1126-1339
Cow position: chr27:6159954-6159747 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 99

Conread position: 1127-1314
Cow position: chr27:13970417-13970595 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 1127-1324
Cow position: chr27:20765987-20766179 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 134, 48

Conread position: 1127-1331
Cow position: chr27:24341876-24341669 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 133, 10

Conread position: 1128-1349
Cow position: chr27:8430467-8430690 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 43

Conread position: 1130-1308
Cow position: chr27:26161471-26161294 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 23, 43

Conread position: 1130-1327
Cow position: chr27:490864-490675 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 124, 50

Conread position: 1130-1328
Cow position: chr27:29038971-29039170 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 138

Conread position: 1130-1329
Cow position: chr27:10119109-10119314 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 39

Conread position: 1130-1329
Cow position: chr27:12247648-12247457 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 47

Conread position: 1130-1344
Cow position: chr27:19543950-19544166 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 80, 195

Conread position: 1131-1324
Cow position: chr27:11356573-11356757 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 1131-1324
Cow position: chr27:27841938-27842120 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 126, 0

Conread position: 1132-1318
Cow position: chr27:19083748-19083937 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 1132-1336
Cow position: chr27:25998670-25998469 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 164

Conread position: 1133-1331
Cow position: chr27:12244159-12244359 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 126, 0

Conread position: 1134-1291
Cow position: chr27:3922525-3922682 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 117

Conread position: 1135-1344
Cow position: chr27:11746554-11746345 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 7, 188

Conread position: 1136-1331
Cow position: chr27:30811415-30811223 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 115, 19

Conread position: 1137-1324
Cow position: chr27:25982761-25982944 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 114, 42

Conread position: 1140-1321
Cow position: chr27:30365278-30365095 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 1141-1343
Cow position: chr27:25880060-25879856 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 31

Conread position: 1142-1273
Cow position: chr27:15523840-15523971 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1167-1306
Cow position: chr27:11208831-11208967 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 137, 82

Conread position: 1171-1311
Cow position: chr27:1899643-1899784 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 86, 109

Conread position: 1175-1308
Cow position: chr27:6037096-6036960 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Show alignments to all cow chromosomes.