Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8002H01.5
        

               Conread position:
               1046-1314
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1057-1331
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               26, 33
               

               Conread position:
               1058-1329
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               25, 113
               

               Conread position:
               1058-1329
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               21, 67
               

               Conread position:
               1059-1318
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               40, 82
               

               Conread position:
               1059-1329
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               24, 250
               

               Conread position:
               1066-1331
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               17, 143
               

               Conread position:
               1066-1332
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               1070-1275
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 64
               

               Conread position:
               1071-1335
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               1100-1331
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1111-1318
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               1111-1329
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               19, 15
               

               Conread position:
               1119-1330
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               1120-1318
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               1125-1328
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               127, 65
               

               Conread position:
               1126-1272
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               1126-1302
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1126-1314
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               127, 14
               

               Conread position:
               1126-1318
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               122, 74
               

               Conread position:
               1126-1330
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               81, 41
               

               Conread position:
               1126-1333
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               123, 59
               

               Conread position:
               1126-1340
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               1126-1344
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               49, 208
               

               Conread position:
               1126-1344
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               12, 46
               

               Conread position:
               1126-1350
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               128, 45
               

               Conread position:
               1126-1350
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               133, 169
               

               Conread position:
               1126-1360
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               129, 38
               

               Conread position:
               1130-1305
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               1130-1318
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1130-1319
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               131, 49
               

               Conread position:
               1130-1324
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               129, 49
               

               Conread position:
               1130-1331
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               121, 182
               

               Conread position:
               1130-1335
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               131, 100
               

               Conread position:
               1130-1344
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1130-1352
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               80, 189
               

               Conread position:
               1131-1310
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1131-1332
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               125, 37
               

               Conread position:
               1132-1324
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               1132-1353
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               115, 39
               

               Conread position:
               1133-1324
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               115, 48
               

               Conread position:
               1133-1343
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               118, 44
               

               Conread position:
               1135-1321
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               119, 40
               

               Conread position:
               1135-1328
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               125, 183
               

               Conread position:
               1138-1314
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               114, 33
               

               Conread position:
               1139-1324
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               72, 41
               

               Conread position:
               1140-1314
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               119, 149
               

               Conread position:
               1140-1315
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               1140-1331
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               50, 36
               

               Conread position:
               1140-1337
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               1141-1315
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               24, 85
               

               Conread position:
               1141-1322
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               1141-1324
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               1147-1330
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               58, 162
               

               Conread position:
               1151-1315
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               31, 77
               

               Conread position:
               1156-1380
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 37
               

               Conread position:
               1163-1304
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               98, 83
               

               Conread position:
               1164-1327
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               1165-1314
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               1168-1293
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               1171-1354
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               86, 100
               

               Conread position:
               1195-1306
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1200-1324
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 0
               
Show alignments to all cow chromosomes.