Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8002H01.5
        

               Conread position:
               1019-1332
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 280
               

               Conread position:
               1049-1318
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               163, 68
               

               Conread position:
               1056-1330
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 114
               

               Conread position:
               1057-1330
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 69
               

               Conread position:
               1058-1308
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               25, 87
               

               Conread position:
               1058-1314
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               39, 124
               

               Conread position:
               1059-1314
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 77
               

               Conread position:
               1059-1318
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               62, 26
               

               Conread position:
               1059-1318
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1059-1357
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               24, 110
               

               Conread position:
               1069-1311
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1076-1266
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1097-1285
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 88
               

               Conread position:
               1098-1336
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               26, 131
               

               Conread position:
               1099-1321
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               30, 41
               

               Conread position:
               1106-1337
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               37, 20
               

               Conread position:
               1111-1318
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               1111-1337
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               150, 15
               

               Conread position:
               1114-1321
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               145, 12
               

               Conread position:
               1120-1308
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               132, 106
               

               Conread position:
               1120-1332
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 22
               

               Conread position:
               1121-1323
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               1121-1329
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               127, 58
               

               Conread position:
               1125-1299
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               134, 54
               

               Conread position:
               1125-1300
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               135, 56
               

               Conread position:
               1125-1321
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               128, 169
               

               Conread position:
               1126-1318
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               1126-1318
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               1126-1321
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               1126-1331
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               119, 64
               

               Conread position:
               1126-1331
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               139, 163
               

               Conread position:
               1126-1332
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               1126-1337
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               125, 199
               

               Conread position:
               1126-1343
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               125, 49
               

               Conread position:
               1126-1344
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               69, 14
               

               Conread position:
               1126-1360
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               123, 25
               

               Conread position:
               1126-1360
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               199, 39
               

               Conread position:
               1128-1257
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1128-1321
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               132, 57
               

               Conread position:
               1128-1324
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1129-1324
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 89
               

               Conread position:
               1130-1318
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1130-1319
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               80, 140
               

               Conread position:
               1130-1321
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               131, 28
               

               Conread position:
               1130-1326
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               1130-1330
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               131, 51
               

               Conread position:
               1130-1346
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               119, 96
               

               Conread position:
               1130-1354
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               81, 138
               

               Conread position:
               1132-1324
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               11, 96
               

               Conread position:
               1132-1337
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               78, 106
               

               Conread position:
               1140-1306
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1140-1311
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               108, 145
               

               Conread position:
               1140-1315
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1140-1321
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1140-1342
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1142-1333
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 36
               

               Conread position:
               1143-1324
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               1144-1320
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1145-1324
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               1146-1337
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               106, 30
               

               Conread position:
               1149-1293
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               1149-1324
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               61, 30
               

               Conread position:
               1149-1338
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 177
               

               Conread position:
               1155-1329
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               102, 26
               

               Conread position:
               1156-1332
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1158-1345
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               97, 66
               

               Conread position:
               1163-1341
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 78
               

               Conread position:
               1165-1331
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1165-1333
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               95, 67
               

               Conread position:
               1165-1339
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               86, 48
               

               Conread position:
               1167-1330
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1172-1328
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               39, 0
               
Show alignments to all cow chromosomes.