Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8002H01.5
        

               Conread position:
               1032-1318
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 228
               

               Conread position:
               1040-1308
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               41, 187
               

               Conread position:
               1045-1240
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1048-1314
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               32, 163
               

               Conread position:
               1048-1324
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               30, 62
               

               Conread position:
               1056-1318
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               44, 28
               

               Conread position:
               1058-1335
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               18, 146
               

               Conread position:
               1059-1275
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1059-1318
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 128
               

               Conread position:
               1059-1325
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               1059-1327
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1059-1332
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 85
               

               Conread position:
               1063-1301
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1064-1318
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               72, 11
               

               Conread position:
               1068-1342
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               142, 8
               

               Conread position:
               1076-1295
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 21
               

               Conread position:
               1082-1292
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1100-1335
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               1118-1309
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               135, 8
               

               Conread position:
               1120-1308
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               127, 55
               

               Conread position:
               1120-1315
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1120-1315
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               1120-1318
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               141, 7
               

               Conread position:
               1121-1321
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 72
               

               Conread position:
               1123-1334
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1124-1272
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               139, 85
               

               Conread position:
               1125-1328
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               85, 15
               

               Conread position:
               1126-1290
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 64
               

               Conread position:
               1126-1308
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               122, 84
               

               Conread position:
               1126-1311
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               125, 52
               

               Conread position:
               1126-1315
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               125, 107
               

               Conread position:
               1126-1319
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               6, 176
               

               Conread position:
               1126-1321
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 123
               

               Conread position:
               1126-1324
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               125, 100
               

               Conread position:
               1126-1324
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               1126-1324
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               84, 151
               

               Conread position:
               1126-1329
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               85, 164
               

               Conread position:
               1126-1331
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               84, 173
               

               Conread position:
               1127-1335
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               82, 169
               

               Conread position:
               1129-1324
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               120, 46
               

               Conread position:
               1130-1307
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1130-1320
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               129, 47
               

               Conread position:
               1130-1330
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               1130-1344
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               94, 41
               

               Conread position:
               1131-1315
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               21, 122
               

               Conread position:
               1131-1318
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1131-1330
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               117, 10
               

               Conread position:
               1132-1315
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               117, 18
               

               Conread position:
               1133-1331
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               122, 47
               

               Conread position:
               1136-1255
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1136-1311
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               121, 18
               

               Conread position:
               1137-1308
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               124, 151
               

               Conread position:
               1140-1288
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1140-1314
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               109, 39
               

               Conread position:
               1140-1324
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1140-1324
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               119, 47
               

               Conread position:
               1140-1330
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1140-1331
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               1140-1335
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               111, 24
               

               Conread position:
               1140-1361
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               58, 8
               

               Conread position:
               1141-1265
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1143-1308
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 119
               

               Conread position:
               1143-1331
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               118, 153
               

               Conread position:
               1144-1334
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               67, 35
               

               Conread position:
               1145-1318
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               99, 34
               

               Conread position:
               1155-1330
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               28, 24
               

               Conread position:
               1157-1320
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               103, 71
               

               Conread position:
               1165-1332
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1168-1340
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 157
               

               Conread position:
               1198-1340
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.