Cow genome map

Conread name: Ss1.1-Pig3-SRG8002H01.5

Conread position: 1032-1318
Cow position: chr8:34287801-34288108 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 228

Conread position: 1040-1308
Cow position: chr8:49819772-49819495 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 187

Conread position: 1045-1240
Cow position: chr8:22103291-22103091 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1048-1314
Cow position: chr8:31646114-31645838 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 163

Conread position: 1048-1324
Cow position: chr8:53866002-53866294 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 30, 62

Conread position: 1056-1318
Cow position: chr8:55305004-55305269 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 28

Conread position: 1058-1335
Cow position: chr8:39967889-39967605 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 146

Conread position: 1059-1275
Cow position: chr8:45987897-45987655 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1059-1318
Cow position: chr8:21137367-21137095 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 128

Conread position: 1059-1325
Cow position: chr8:11896122-11896393 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 22

Conread position: 1059-1327
Cow position: chr8:37122879-37123162 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 1059-1332
Cow position: chr8:24934057-24934315 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 85

Conread position: 1063-1301
Cow position: chr8:33510708-33510449 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 1064-1318
Cow position: chr8:15686482-15686214 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 72, 11

Conread position: 1068-1342
Cow position: chr8:32827735-32827466 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 142, 8

Conread position: 1076-1295
Cow position: chr8:48763480-48763710 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 21

Conread position: 1082-1292
Cow position: chr8:5700338-5700119 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1100-1335
Cow position: chr8:39017672-39017912 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 151, 0

Conread position: 1118-1309
Cow position: chr8:60320508-60320692 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 135, 8

Conread position: 1120-1308
Cow position: chr8:43693200-43693385 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 127, 55

Conread position: 1120-1315
Cow position: chr8:13813437-13813238 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 1120-1315
Cow position: chr8:23160937-23161134 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 131, 0

Conread position: 1120-1318
Cow position: chr8:4424270-4424468 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 141, 7

Conread position: 1121-1321
Cow position: chr8:56033883-56033681 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 72

Conread position: 1123-1334
Cow position: chr8:49576923-49577130 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 1124-1272
Cow position: chr8:40371410-40371263 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 139, 85

Conread position: 1125-1328
Cow position: chr8:9583548-9583347 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 85, 15

Conread position: 1126-1290
Cow position: chr8:49599930-49599765 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 64

Conread position: 1126-1308
Cow position: chr8:55829353-55829171 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 122, 84

Conread position: 1126-1311
Cow position: chr8:13975888-13976070 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 125, 52

Conread position: 1126-1315
Cow position: chr8:24426648-24426838 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 125, 107

Conread position: 1126-1319
Cow position: chr8:50266280-50266475 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 6, 176

Conread position: 1126-1321
Cow position: chr8:49510901-49510716 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 123

Conread position: 1126-1324
Cow position: chr8:8134506-8134307 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 125, 100

Conread position: 1126-1324
Cow position: chr8:37487304-37487103 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 134, 0

Conread position: 1126-1324
Cow position: chr8:49265309-49265109 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 151

Conread position: 1126-1329
Cow position: chr8:29413885-29414085 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 164

Conread position: 1126-1331
Cow position: chr8:33218961-33218753 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 84, 173

Conread position: 1127-1335
Cow position: chr8:27294723-27294929 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 82, 169

Conread position: 1129-1324
Cow position: chr8:37114910-37114720 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 120, 46

Conread position: 1130-1307
Cow position: chr8:20832327-20832145 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 1130-1320
Cow position: chr8:25075595-25075782 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 129, 47

Conread position: 1130-1330
Cow position: chr8:6469169-6468967 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 119, 0

Conread position: 1130-1344
Cow position: chr8:20682392-20682610 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 94, 41

Conread position: 1131-1315
Cow position: chr8:31690807-31690988 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 21, 122

Conread position: 1131-1318
Cow position: chr8:43803548-43803739 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 120, 0

Conread position: 1131-1330
Cow position: chr8:13810204-13810403 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 117, 10

Conread position: 1132-1315
Cow position: chr8:41318040-41318220 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 18

Conread position: 1133-1331
Cow position: chr8:46203268-46203466 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 122, 47

Conread position: 1136-1255
Cow position: chr8:30934918-30935037 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1136-1311
Cow position: chr8:15803641-15803470 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 121, 18

Conread position: 1137-1308
Cow position: chr8:26922628-26922798 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 151

Conread position: 1140-1288
Cow position: chr8:54070759-54070905 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 1140-1314
Cow position: chr8:36505387-36505558 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 109, 39

Conread position: 1140-1324
Cow position: chr8:11594044-11594231 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 1140-1324
Cow position: chr8:26451130-26451317 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 119, 47

Conread position: 1140-1330
Cow position: chr8:51905031-51904839 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 1140-1331
Cow position: chr8:17077829-17078022 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 113, 0

Conread position: 1140-1335
Cow position: chr8:51695375-51695180 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 24

Conread position: 1140-1361
Cow position: chr8:15536990-15536765 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 8

Conread position: 1141-1265
Cow position: chr8:1107181-1107054 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 1143-1308
Cow position: chr8:59656183-59656018 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 119

Conread position: 1143-1331
Cow position: chr8:45163034-45163223 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 118, 153

Conread position: 1144-1334
Cow position: chr8:23030647-23030833 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 67, 35

Conread position: 1145-1318
Cow position: chr8:13900414-13900587 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 34

Conread position: 1155-1330
Cow position: chr8:60949721-60949543 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 28, 24

Conread position: 1157-1320
Cow position: chr8:18743520-18743682 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 103, 71

Conread position: 1165-1332
Cow position: chr8:36274300-36274130 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1168-1340
Cow position: chr8:57420931-57421104 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 157

Conread position: 1198-1340
Cow position: chr8:25417435-25417293 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.