Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8002N16.3
        

               Conread position:
               1-160
               

               Cow position:
               chr3:40074263-40074422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr3:41052189-41052030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               138
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               163-288
               

               Cow position:
               chr3:41050628-41050503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               288-479
               

               Cow position:
               chr3:41048113-41047920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               474-651
               

               Cow position:
               chr3:40076180-40076358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               486-658
               

               Cow position:
               chr3:41047151-41046981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               672-945
               

               Cow position:
               chr3:41046016-41045756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               84, 90
               
Show alignments to all cow chromosomes.