Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8003G23.5
        

               Conread position:
               1-547
               

               Cow position:
               chr17:22552026-22551480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               551
               

               Alignm identity:
               322
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               347, 330
               

               Conread position:
               4-519
               

               Cow position:
               chr17:22473407-22473922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               300
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               64, 74
               

               Conread position:
               4-570
               

               Cow position:
               chr17:22552527-22551961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               574
               

               Alignm identity:
               349
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               65, 73
               

               Conread position:
               5-553
               

               Cow position:
               chr17:22589776-22589228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               555
               

               Alignm identity:
               328
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               108, 93
               

               Conread position:
               8-623
               

               Cow position:
               chr17:22552103-22551490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               620
               

               Alignm identity:
               367
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               61, 73
               

               Conread position:
               8-1048
               

               Cow position:
               chr17:22552775-22551707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               1077
               

               Alignm identity:
               638
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               40-1051
               

               Cow position:
               chr17:22552995-22551956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               1051
               

               Alignm identity:
               622
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 118
               

               Conread position:
               79-820
               

               Cow position:
               chr17:22590290-22589540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               759
               

               Alignm identity:
               442
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               185-870
               

               Cow position:
               chr17:22590268-22589574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               704
               

               Alignm identity:
               416
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               131, 112
               
Show alignments to all cow chromosomes.