Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8003G23.5 |
| Conread position: | 1-474 |
| Cow position: | chr22:14429967-14430440 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 290 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 88, 82 |
| Conread position: | 1-553 |
| Cow position: | chr22:12458455-12457903 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 165, 136 |
| Conread position: | 1-554 |
| Cow position: | chr22:14468044-14468597 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 318 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 366, 374 |
| Conread position: | 1-589 |
| Cow position: | chr22:11640759-11641347 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 346 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 113, 86 |
| Conread position: | 1-601 |
| Cow position: | chr22:11640843-11641443 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 353 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 80, 75 |
| Conread position: | 1-770 |
| Cow position: | chr22:12476068-12475290 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 460 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 63, 77 |
| Conread position: | 1-859 |
| Cow position: | chr22:12399691-12398824 (view UCSC Genome Browser custom track) |
| Alignm length: | 874 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 76 |
| Conread position: | 1-859 |
| Cow position: | chr22:12431671-12430804 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 515 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 60, 73 |
| Conread position: | 1-860 |
| Cow position: | chr22:12498939-12499807 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 513 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 60, 88 |
| Conread position: | 1-1052 |
| Cow position: | chr22:12544734-12545785 (view UCSC Genome Browser custom track) |
| Alignm length: | 1052 |
| Alignm identity: | 897 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-593 |
| Cow position: | chr22:12385514-12384921 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 348 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 110, 137 |
| Conread position: | 4-506 |
| Cow position: | chr22:11640930-11641432 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 305 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 75, 71 |
| Conread position: | 5-1034 |
| Cow position: | chr22:12432423-12431367 (view UCSC Genome Browser custom track) |
| Alignm length: | 1066 |
| Alignm identity: | 616 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 6-334 |
| Cow position: | chr22:12499616-12499944 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 68 |
| Conread position: | 6-509 |
| Cow position: | chr22:12458282-12457779 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 71 |
| Conread position: | 8-525 |
| Cow position: | chr22:11701177-11701694 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 306 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 325, 320 |
| Conread position: | 8-889 |
| Cow position: | chr22:14430058-14430945 (view UCSC Genome Browser custom track) |
| Alignm length: | 900 |
| Alignm identity: | 520 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 81, 75 |
| Conread position: | 23-1047 |
| Cow position: | chr22:12399837-12398785 (view UCSC Genome Browser custom track) |
| Alignm length: | 1062 |
| Alignm identity: | 628 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 54 |
| Conread position: | 26-1030 |
| Cow position: | chr22:12476379-12475348 (view UCSC Genome Browser custom track) |
| Alignm length: | 1039 |
| Alignm identity: | 606 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 123, 106 |
| Conread position: | 163-558 |
| Cow position: | chr22:12458461-12458066 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 175-870 |
| Cow position: | chr22:12458533-12457829 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 413 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 427, 488 |
| Conread position: | 176-600 |
| Cow position: | chr22:12385508-12385082 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 143 |
| Conread position: | 186-884 |
| Cow position: | chr22:12458606-12457897 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 427 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 49, 39 |
Show alignments to all cow chromosomes.