Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8003G23.5 |
| Conread position: | 1-395 |
| Cow position: | chr25:23420451-23420844 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 65 |
| Conread position: | 1-576 |
| Cow position: | chr25:33299219-33299794 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 346 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 1-599 |
| Cow position: | chr25:34447006-34447604 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 369 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 67, 76 |
| Conread position: | 1-860 |
| Cow position: | chr25:34770140-34769272 (view UCSC Genome Browser custom track) |
| Alignm length: | 870 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 587, 619 |
| Conread position: | 1-867 |
| Cow position: | chr25:33298799-33299676 (view UCSC Genome Browser custom track) |
| Alignm length: | 886 |
| Alignm identity: | 508 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 247, 235 |
| Conread position: | 4-576 |
| Cow position: | chr25:34447093-34447666 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 342 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 116, 95 |
| Conread position: | 5-356 |
| Cow position: | chr25:33127874-33128227 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 317, 335 |
| Conread position: | 5-525 |
| Cow position: | chr25:33157317-33156797 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 302 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 80, 97 |
| Conread position: | 6-514 |
| Cow position: | chr25:36801448-36801956 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 8-570 |
| Cow position: | chr25:34447181-34447741 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 338 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 61, 66 |
| Conread position: | 10-513 |
| Cow position: | chr25:23420376-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 295 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 14-576 |
| Cow position: | chr25:36801372-36801934 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 326 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 119, 108 |
| Conread position: | 18-1042 |
| Cow position: | chr25:33298564-33299616 (view UCSC Genome Browser custom track) |
| Alignm length: | 1061 |
| Alignm identity: | 611 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 124, 147 |
| Conread position: | 22-598 |
| Cow position: | chr25:33157468-33156890 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 350 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 174-1046 |
| Cow position: | chr25:33298468-33299368 (view UCSC Genome Browser custom track) |
| Alignm length: | 910 |
| Alignm identity: | 541 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 176-1047 |
| Cow position: | chr25:33298638-33299537 (view UCSC Genome Browser custom track) |
| Alignm length: | 907 |
| Alignm identity: | 545 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 132, 146 |
| Conread position: | 179-576 |
| Cow position: | chr25:23420377-23420775 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 390, 0 |
| Conread position: | 182-593 |
| Cow position: | chr25:36801372-36801785 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 187-1029 |
| Cow position: | chr25:36800633-36801490 (view UCSC Genome Browser custom track) |
| Alignm length: | 868 |
| Alignm identity: | 508 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 202-576 |
| Cow position: | chr25:23420316-23420691 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 115, 125 |
| Conread position: | 213-554 |
| Cow position: | chr25:33127746-33128087 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 243-522 |
| Cow position: | chr25:346506-346785 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 51 |
| Conread position: | 269-1037 |
| Cow position: | chr25:34446938-34447731 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 466 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 363, 323 |
| Conread position: | 281-1030 |
| Cow position: | chr25:33157545-33156770 (view UCSC Genome Browser custom track) |
| Alignm length: | 783 |
| Alignm identity: | 476 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 108, 103 |
| Conread position: | 658-863 |
| Cow position: | chr25:22235975-22236180 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 671-1029 |
| Cow position: | chr25:33127793-33128169 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 190, 0 |
Show alignments to all cow chromosomes.