Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8003G23.5
        

               Conread position:
               1-553
               

               Cow position:
               chrX:25309790-25310342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               558
               

               Alignm identity:
               331
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               1-1030
               

               Cow position:
               chrX:25325519-25324463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               1069
               

               Alignm identity:
               619
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 73
               

               Conread position:
               2-899
               

               Cow position:
               chrX:25325770-25324864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               914
               

               Alignm identity:
               536
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               48, 63
               

               Conread position:
               80-586
               

               Cow position:
               chrX:29045281-29044775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               234, 229
               

               Conread position:
               111-559
               

               Cow position:
               chrX:25309732-25310180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               122, 114
               

               Conread position:
               176-553
               

               Cow position:
               chrX:25309713-25310090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               159, 169
               

               Conread position:
               176-775
               

               Cow position:
               chrX:29045269-29044661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               612
               

               Alignm identity:
               363
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               159, 163
               

               Conread position:
               176-1034
               

               Cow position:
               chrX:29045836-29044972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               881
               

               Alignm identity:
               511
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               284, 279
               

               Conread position:
               661-884
               

               Cow position:
               chrX:13826547-13826322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               211, 0
               
Show alignments to all cow chromosomes.