Cow genome map

Conread name: Ss1.1-Pig3-SRG8003L15.5

Conread position: 335-500
Cow position: chr13:2776002-2776164 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 22, 34

Conread position: 346-473
Cow position: chr13:29957730-29957861 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 348-500
Cow position: chr13:3153477-3153627 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 361-500
Cow position: chr13:28605651-28605515 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 13, 44

Conread position: 368-495
Cow position: chr13:31398204-31398331 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 64

Conread position: 368-499
Cow position: chr13:30315247-30315379 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 12

Conread position: 368-500
Cow position: chr13:8481910-8482037 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 368-501
Cow position: chr13:56019248-56019117 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 11

Conread position: 369-500
Cow position: chr13:11146802-11146933 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 39

Conread position: 369-500
Cow position: chr13:20654116-20653982 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 369-501
Cow position: chr13:8537565-8537699 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 371-499
Cow position: chr13:19182918-19182793 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 373-501
Cow position: chr13:23975413-23975285 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 375-501
Cow position: chr13:52641199-52641071 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 80

Conread position: 376-501
Cow position: chr13:14411643-14411772 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 377-500
Cow position: chr13:43576768-43576890 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 378-499
Cow position: chr13:46143150-46143273 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 380-500
Cow position: chr13:25969767-25969879 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 383-499
Cow position: chr13:2529188-2529073 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 383-500
Cow position: chr13:11410470-11410586 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 94

Conread position: 383-501
Cow position: chr13:21280742-21280620 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 384-501
Cow position: chr13:15993149-15993264 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 384-501
Cow position: chr13:48126868-48126985 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 385-499
Cow position: chr13:40483215-40483101 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 28

Conread position: 385-501
Cow position: chr13:10055178-10055297 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 385-503
Cow position: chr13:369359-369244 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 386-501
Cow position: chr13:26317126-26317010 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 386-501
Cow position: chr13:37030113-37030230 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 388-486
Cow position: chr13:16709582-16709680 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 388-501
Cow position: chr13:21246945-21246832 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 390-500
Cow position: chr13:17994605-17994493 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 391-501
Cow position: chr13:47340096-47340206 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 393-500
Cow position: chr13:34606460-34606568 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 90

Conread position: 394-500
Cow position: chr13:24094545-24094437 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 395-499
Cow position: chr13:30396491-30396596 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 10, 101

Conread position: 395-500
Cow position: chr13:3149659-3149555 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 86

Conread position: 395-500
Cow position: chr13:20042489-20042384 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 395-500
Cow position: chr13:40109763-40109866 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 395-501
Cow position: chr13:52929204-52929312 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 395-518
Cow position: chr13:29802402-29802519 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 396-501
Cow position: chr13:26483007-26482902 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 396-519
Cow position: chr13:55007994-55007867 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 403-500
Cow position: chr13:19033338-19033435 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 404-500
Cow position: chr13:43577771-43577867 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 407-501
Cow position: chr13:29507397-29507492 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 86, 0

Show alignments to all cow chromosomes.