Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8003L15.5 |
| Conread position: | 320-500 |
| Cow position: | chr2:49467915-49467739 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 41 |
| Conread position: | 359-501 |
| Cow position: | chr2:45799676-45799820 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 360-500 |
| Cow position: | chr2:13468457-13468323 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 363-499 |
| Cow position: | chr2:72315568-72315704 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 364-502 |
| Cow position: | chr2:882091-882225 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 365-488 |
| Cow position: | chr2:28452709-28452830 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 366-500 |
| Cow position: | chr2:15058820-15058955 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 373-497 |
| Cow position: | chr2:29806172-29806046 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 375-497 |
| Cow position: | chr2:44215730-44215610 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 381-500 |
| Cow position: | chr2:35466310-35466428 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 383-490 |
| Cow position: | chr2:38969258-38969368 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 383-499 |
| Cow position: | chr2:66027782-66027667 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 384-499 |
| Cow position: | chr2:29290095-29290208 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 384-501 |
| Cow position: | chr2:6304064-6304181 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-501 |
| Cow position: | chr2:9725877-9725994 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-501 |
| Cow position: | chr2:24217993-24218105 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 13, 93 |
| Conread position: | 384-501 |
| Cow position: | chr2:36124656-36124539 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-501 |
| Cow position: | chr2:72359407-72359525 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 386-474 |
| Cow position: | chr2:77990071-77989983 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-500 |
| Cow position: | chr2:14855673-14855558 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 387-500 |
| Cow position: | chr2:67810819-67810933 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 387-501 |
| Cow position: | chr2:29551101-29551213 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 388-489 |
| Cow position: | chr2:9687303-9687403 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 389-500 |
| Cow position: | chr2:67302236-67302125 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 392-501 |
| Cow position: | chr2:13369870-13369763 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 392-501 |
| Cow position: | chr2:28751410-28751303 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 392-501 |
| Cow position: | chr2:40508379-40508488 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 393-500 |
| Cow position: | chr2:19017668-19017561 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 393-500 |
| Cow position: | chr2:84343933-84344041 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 394-502 |
| Cow position: | chr2:38954046-38953938 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 395-501 |
| Cow position: | chr2:19191609-19191709 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 395-501 |
| Cow position: | chr2:22759762-22759869 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 395-501 |
| Cow position: | chr2:32660393-32660286 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 395-501 |
| Cow position: | chr2:38662484-38662592 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 395-501 |
| Cow position: | chr2:65059255-65059155 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 395-520 |
| Cow position: | chr2:9416591-9416714 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 397-497 |
| Cow position: | chr2:56095093-56094992 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 397-501 |
| Cow position: | chr2:67745459-67745351 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 399-519 |
| Cow position: | chr2:12873615-12873492 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 401-499 |
| Cow position: | chr2:13544194-13544097 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 406-501 |
| Cow position: | chr2:6039216-6039121 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 80 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-501 |
| Cow position: | chr2:11163022-11163116 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 410-498 |
| Cow position: | chr2:39864623-39864535 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 79 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.