Cow genome map

Conread name: Ss1.1-Pig3-SRG8003O23.3

Conread position: 516-657
Cow position: chr23:41099594-41099732 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 528-717
Cow position: chr23:9268751-9268571 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 534-657
Cow position: chr23:4336232-4336110 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 546-657
Cow position: chr23:18354804-18354693 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 16, 73

Conread position: 546-657
Cow position: chr23:35199494-35199384 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 546-715
Cow position: chr23:13673876-13674042 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 16, 131

Conread position: 546-724
Cow position: chr23:33717387-33717558 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 55

Conread position: 546-726
Cow position: chr23:21336330-21336505 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 17

Conread position: 547-715
Cow position: chr23:3814126-3814291 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 17

Conread position: 547-720
Cow position: chr23:3244315-3244484 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 17

Conread position: 549-719
Cow position: chr23:1883550-1883380 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 118

Conread position: 552-717
Cow position: chr23:35368895-35369058 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 64

Conread position: 553-715
Cow position: chr23:14524133-14523976 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 10, 0

Conread position: 553-720
Cow position: chr23:14164248-14164413 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 33

Conread position: 553-724
Cow position: chr23:3281974-3282141 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 40

Conread position: 562-710
Cow position: chr23:6244458-6244601 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 562-717
Cow position: chr23:1194351-1194504 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 103

Conread position: 562-717
Cow position: chr23:5881377-5881530 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 116

Conread position: 562-719
Cow position: chr23:3293833-3293681 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 562-719
Cow position: chr23:7845435-7845279 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 97

Conread position: 562-724
Cow position: chr23:1981524-1981678 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 562-727
Cow position: chr23:18823128-18822967 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 562-743
Cow position: chr23:17597567-17597386 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 116

Conread position: 563-719
Cow position: chr23:5426568-5426419 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 566-717
Cow position: chr23:40637391-40637246 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 28

Conread position: 569-709
Cow position: chr23:27849129-27848992 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 95

Conread position: 569-715
Cow position: chr23:1290429-1290287 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 569-715
Cow position: chr23:21502499-21502647 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 105, 0

Conread position: 569-715
Cow position: chr23:22238690-22238832 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 569-716
Cow position: chr23:13511857-13511711 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 569-717
Cow position: chr23:8698552-8698408 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 569-717
Cow position: chr23:11212639-11212495 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 569-719
Cow position: chr23:2501722-2501868 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 90, 0

Conread position: 569-719
Cow position: chr23:21452598-21452744 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 569-720
Cow position: chr23:25990306-25990452 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 569-726
Cow position: chr23:24926946-24926793 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 23, 73

Conread position: 570-719
Cow position: chr23:12363487-12363632 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 570-724
Cow position: chr23:5707124-5706974 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 571-717
Cow position: chr23:1877766-1877908 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 571-719
Cow position: chr23:2282053-2282193 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 573-719
Cow position: chr23:26986144-26986285 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 576-718
Cow position: chr23:16961422-16961284 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 577-716
Cow position: chr23:348824-348959 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 578-717
Cow position: chr23:1760720-1760858 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 84

Conread position: 578-719
Cow position: chr23:13202236-13202372 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 581-719
Cow position: chr23:29458979-29459113 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 0

Show alignments to all cow chromosomes.