Cow genome map

Conread name: Ss1.1-Pig3-SRG8003O23.3

Conread position: 546-717
Cow position: chr28:8021948-8022112 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 34

Conread position: 547-711
Cow position: chr28:6971193-6971352 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 548-719
Cow position: chr28:2960675-2960843 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 22

Conread position: 549-720
Cow position: chr28:27161178-27161339 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 550-723
Cow position: chr28:32179847-32179681 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 110

Conread position: 551-717
Cow position: chr28:21868614-21868447 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 112

Conread position: 561-717
Cow position: chr28:5204341-5204185 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 125

Conread position: 561-720
Cow position: chr28:13474439-13474287 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 562-657
Cow position: chr28:8681291-8681384 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 562-702
Cow position: chr28:9109357-9109221 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 45

Conread position: 562-711
Cow position: chr28:30902267-30902122 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 562-713
Cow position: chr28:16879714-16879567 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 0

Conread position: 562-714
Cow position: chr28:17948971-17949120 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 98

Conread position: 562-715
Cow position: chr28:11884380-11884529 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 562-716
Cow position: chr28:8396476-8396326 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 562-716
Cow position: chr28:9684191-9684343 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 99

Conread position: 562-717
Cow position: chr28:4071107-4070957 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 562-717
Cow position: chr28:7131945-7132097 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 91

Conread position: 562-717
Cow position: chr28:11426402-11426551 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 562-720
Cow position: chr28:4016672-4016518 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 36

Conread position: 562-720
Cow position: chr28:4881097-4881253 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 99

Conread position: 562-720
Cow position: chr28:12991281-12991123 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 14

Conread position: 562-720
Cow position: chr28:22813394-22813249 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 562-726
Cow position: chr28:4013229-4013065 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 101

Conread position: 562-727
Cow position: chr28:7619009-7619170 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 562-817
Cow position: chr28:19564089-19564330 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 245, 37

Conread position: 563-716
Cow position: chr28:4188693-4188535 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 33

Conread position: 563-717
Cow position: chr28:11828822-11828966 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 563-720
Cow position: chr28:17739962-17739812 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 569-715
Cow position: chr28:19025871-19026013 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 569-716
Cow position: chr28:2131790-2131933 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 569-717
Cow position: chr28:5255008-5254864 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 569-718
Cow position: chr28:26531145-26531288 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 569-719
Cow position: chr28:29988977-29989131 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 90, 32

Conread position: 569-720
Cow position: chr28:8149498-8149645 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 570-717
Cow position: chr28:9636324-9636467 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 570-726
Cow position: chr28:10977974-10977822 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 77, 30

Conread position: 571-717
Cow position: chr28:7350786-7350644 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 573-715
Cow position: chr28:3445349-3445489 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 10, 79

Conread position: 573-716
Cow position: chr28:4182133-4181992 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 88

Conread position: 576-717
Cow position: chr28:777804-777665 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 83

Conread position: 579-724
Cow position: chr28:3914841-3914699 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 113, 80

Conread position: 582-717
Cow position: chr28:3147600-3147472 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 74, 0

Show alignments to all cow chromosomes.