Cow genome map

Conread name: Ss1.1-Pig3-SRG8003O23.3

Conread position: 1-110
Cow position: chr3:26660294-26660187 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 98
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 519-717
Cow position: chr3:17447462-17447651 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 45

Conread position: 529-657
Cow position: chr3:27670560-27670430 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 18

Conread position: 532-727
Cow position: chr3:53508752-53508562 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 533-724
Cow position: chr3:26874735-26874550 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 130

Conread position: 533-726
Cow position: chr3:12711774-12711963 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 130, 0

Conread position: 538-717
Cow position: chr3:3316684-3316854 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 546-656
Cow position: chr3:20719181-20719292 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 546-710
Cow position: chr3:24372049-24371890 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 546-717
Cow position: chr3:44330308-44330476 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 16, 129

Conread position: 546-719
Cow position: chr3:82629444-82629275 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 55

Conread position: 547-717
Cow position: chr3:15506575-15506410 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 32

Conread position: 549-717
Cow position: chr3:80072253-80072090 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 44, 14

Conread position: 551-726
Cow position: chr3:13507590-13507420 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 552-730
Cow position: chr3:59920151-59919980 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 109

Conread position: 553-714
Cow position: chr3:55984220-55984063 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 95

Conread position: 553-715
Cow position: chr3:5305917-5305761 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 554-719
Cow position: chr3:26603435-26603596 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 554-719
Cow position: chr3:55271922-55272086 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 133

Conread position: 561-717
Cow position: chr3:23132056-23132208 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 561-717
Cow position: chr3:41652490-41652337 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 99

Conread position: 562-712
Cow position: chr3:22924263-22924409 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 97, 109

Conread position: 562-715
Cow position: chr3:55177634-55177783 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 562-715
Cow position: chr3:80565081-80564930 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 98

Conread position: 562-717
Cow position: chr3:82123433-82123587 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 8, 103

Conread position: 562-719
Cow position: chr3:23408246-23408397 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 562-719
Cow position: chr3:68616218-68616364 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 563-715
Cow position: chr3:70762011-70762157 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 17, 95

Conread position: 563-717
Cow position: chr3:20677733-20677878 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 563-726
Cow position: chr3:6182116-6182269 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 17

Conread position: 569-709
Cow position: chr3:20021374-20021238 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 569-717
Cow position: chr3:16752154-16752297 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 569-717
Cow position: chr3:22165311-22165454 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 569-719
Cow position: chr3:4481047-4480902 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 569-720
Cow position: chr3:45882003-45881856 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 569-720
Cow position: chr3:67704651-67704504 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 570-717
Cow position: chr3:60264612-60264755 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 570-719
Cow position: chr3:54506813-54506666 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 91

Conread position: 571-666
Cow position: chr3:8523052-8523146 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 571-717
Cow position: chr3:9120945-9120806 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 571-717
Cow position: chr3:38100246-38100102 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 88

Conread position: 571-720
Cow position: chr3:59604946-59604804 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 572-726
Cow position: chr3:61224640-61224792 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 28

Conread position: 573-724
Cow position: chr3:56059912-56059765 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 574-720
Cow position: chr3:56476782-56476640 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 576-718
Cow position: chr3:44960907-44961044 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 577-717
Cow position: chr3:52608279-52608143 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 578-719
Cow position: chr3:73461062-73460926 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 580-719
Cow position: chr3:53150425-53150284 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 581-717
Cow position: chr3:68156816-68156683 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 67, 82

Conread position: 584-717
Cow position: chr3:51349913-51349784 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 75, 0

Show alignments to all cow chromosomes.