Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8003O23.3 |
| Conread position: | 517-721 |
| Cow position: | chr6:21066663-21066863 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 524-657 |
| Cow position: | chr6:47676227-47676093 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 532-717 |
| Cow position: | chr6:54990795-54990976 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 533-720 |
| Cow position: | chr6:6343635-6343448 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 58 |
| Conread position: | 536-657 |
| Cow position: | chr6:60186463-60186582 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 546-714 |
| Cow position: | chr6:60451621-60451455 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 115 |
| Conread position: | 546-719 |
| Cow position: | chr6:21869456-21869626 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 114 |
| Conread position: | 547-700 |
| Cow position: | chr6:28900516-28900368 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 547-717 |
| Cow position: | chr6:1002071-1002238 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 117 |
| Conread position: | 547-719 |
| Cow position: | chr6:23465841-23466010 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 547-724 |
| Cow position: | chr6:47799485-47799311 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 113 |
| Conread position: | 550-713 |
| Cow position: | chr6:9302533-9302688 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 551-713 |
| Cow position: | chr6:46282819-46282975 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 551-720 |
| Cow position: | chr6:37149380-37149211 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 112 |
| Conread position: | 558-717 |
| Cow position: | chr6:5609267-5609420 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 561-720 |
| Cow position: | chr6:38640410-38640255 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 562-714 |
| Cow position: | chr6:45690434-45690582 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 563-711 |
| Cow position: | chr6:16091077-16090934 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 563-717 |
| Cow position: | chr6:15243430-15243280 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 563-717 |
| Cow position: | chr6:30024060-30023910 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 563-718 |
| Cow position: | chr6:52478239-52478387 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 566-717 |
| Cow position: | chr6:6401122-6400979 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 569-714 |
| Cow position: | chr6:38207323-38207462 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 569-715 |
| Cow position: | chr6:24468227-24468369 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 569-717 |
| Cow position: | chr6:55282125-55282269 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 569-719 |
| Cow position: | chr6:10105810-10105956 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 569-719 |
| Cow position: | chr6:61109954-61109810 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 570-715 |
| Cow position: | chr6:44194382-44194522 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 571-717 |
| Cow position: | chr6:60144031-60144173 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 572-717 |
| Cow position: | chr6:47575072-47574931 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 572-718 |
| Cow position: | chr6:61524039-61524181 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 575-719 |
| Cow position: | chr6:17414282-17414424 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 582-716 |
| Cow position: | chr6:28976884-28977014 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 594-719 |
| Cow position: | chr6:60350148-60350269 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.