Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8003O23.3 |
| Conread position: | 1-110 |
| Cow position: | chr9:27334807-27334915 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 516-708 |
| Cow position: | chr9:34065705-34065513 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 149 |
| Conread position: | 529-657 |
| Cow position: | chr9:23840533-23840406 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 5, 27 |
| Conread position: | 532-717 |
| Cow position: | chr9:5763766-5763589 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 532-727 |
| Cow position: | chr9:64064496-64064309 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 533-715 |
| Cow position: | chr9:11319769-11319592 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 546-650 |
| Cow position: | chr9:46190018-46190123 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 546-655 |
| Cow position: | chr9:26277709-26277816 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 546-715 |
| Cow position: | chr9:39758394-39758560 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 114 |
| Conread position: | 547-717 |
| Cow position: | chr9:8562701-8562864 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 547-719 |
| Cow position: | chr9:55354490-55354657 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 547-720 |
| Cow position: | chr9:4268107-4267935 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 15, 115 |
| Conread position: | 547-744 |
| Cow position: | chr9:6293473-6293665 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 549-713 |
| Cow position: | chr9:42586673-42586516 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 549-720 |
| Cow position: | chr9:9596075-9595903 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 111 |
| Conread position: | 549-724 |
| Cow position: | chr9:19067665-19067833 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 551-718 |
| Cow position: | chr9:56453223-56453380 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 562-717 |
| Cow position: | chr9:9459877-9460025 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 562-717 |
| Cow position: | chr9:36628010-36628162 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 562-719 |
| Cow position: | chr9:17872219-17872064 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 99 |
| Conread position: | 562-720 |
| Cow position: | chr9:7806066-7805914 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 562-720 |
| Cow position: | chr9:13670524-13670681 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 17, 131 |
| Conread position: | 562-726 |
| Cow position: | chr9:8629024-8628865 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 563-717 |
| Cow position: | chr9:26279275-26279125 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 563-719 |
| Cow position: | chr9:33119994-33119842 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 569-717 |
| Cow position: | chr9:39011571-39011425 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 8, 89 |
| Conread position: | 569-718 |
| Cow position: | chr9:59013441-59013297 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 96 |
| Conread position: | 569-719 |
| Cow position: | chr9:12910503-12910355 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 92 |
| Conread position: | 569-719 |
| Cow position: | chr9:34286699-34286845 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 569-724 |
| Cow position: | chr9:34024600-34024750 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 569-726 |
| Cow position: | chr9:9686512-9686361 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 569-746 |
| Cow position: | chr9:59699646-59699477 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 570-725 |
| Cow position: | chr9:23970996-23970844 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 573-719 |
| Cow position: | chr9:41728163-41728304 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 67 |
| Conread position: | 576-720 |
| Cow position: | chr9:9551998-9552137 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 576-720 |
| Cow position: | chr9:41785119-41785257 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 582-719 |
| Cow position: | chr9:5219259-5219124 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 584-719 |
| Cow position: | chr9:63361804-63361673 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 600-717 |
| Cow position: | chr9:33823049-33823162 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.