Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8004B15.5 |
| Conread position: | 44-181 |
| Cow position: | chr1:69722013-69722153 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 45-216 |
| Cow position: | chr1:60311548-60311374 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 156 |
| Conread position: | 90-638 |
| Cow position: | chr1:48321912-48321362 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 369 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 84, 133 |
| Conread position: | 111-634 |
| Cow position: | chr1:75184648-75185173 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 327-534 |
| Cow position: | chr1:31978338-31978540 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 329-506 |
| Cow position: | chr1:69722319-69722490 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 329-637 |
| Cow position: | chr1:98413099-98412789 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 6, 24 |
| Conread position: | 331-637 |
| Cow position: | chr1:80315008-80315317 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 187, 22 |
| Conread position: | 336-507 |
| Cow position: | chr1:86302131-86301966 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 336-616 |
| Cow position: | chr1:638126-638420 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 358-518 |
| Cow position: | chr1:84245783-84245619 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 358-519 |
| Cow position: | chr1:47365209-47365371 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 358-557 |
| Cow position: | chr1:30086451-30086245 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 92, 82 |
| Conread position: | 358-616 |
| Cow position: | chr1:93431088-93431340 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 27, 165 |
| Conread position: | 358-637 |
| Cow position: | chr1:32496164-32496443 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 108 |
| Conread position: | 359-519 |
| Cow position: | chr1:29107551-29107387 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 359-637 |
| Cow position: | chr1:89776890-89776604 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 153, 182 |
| Conread position: | 361-636 |
| Cow position: | chr1:5655470-5655196 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 160, 28 |
| Conread position: | 372-514 |
| Cow position: | chr1:17635057-17634912 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 374-616 |
| Cow position: | chr1:10194441-10194215 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 56 |
| Conread position: | 380-519 |
| Cow position: | chr1:21014727-21014586 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 405-637 |
| Cow position: | chr1:36072453-36072682 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 133, 117 |
Show alignments to all cow chromosomes.