Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8004B15.5 |
| Conread position: | 45-179 |
| Cow position: | chr10:36036370-36036238 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 45-278 |
| Cow position: | chr10:15536724-15536494 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 47-181 |
| Cow position: | chr10:48354711-48354844 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 75-521 |
| Cow position: | chr10:33814546-33814092 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 304 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 99, 123 |
| Conread position: | 75-625 |
| Cow position: | chr10:33720321-33720887 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 22 |
| Conread position: | 326-638 |
| Cow position: | chr10:63684760-63685092 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 31, 294 |
| Conread position: | 336-605 |
| Cow position: | chr10:42349373-42349102 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 185, 16 |
| Conread position: | 339-627 |
| Cow position: | chr10:349937-349645 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 358-519 |
| Cow position: | chr10:27305952-27306114 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 358-621 |
| Cow position: | chr10:32421237-32420958 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 27, 135 |
| Conread position: | 358-622 |
| Cow position: | chr10:32983478-32983195 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 138 |
| Conread position: | 359-583 |
| Cow position: | chr10:68375511-68375283 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 159, 101 |
| Conread position: | 359-615 |
| Cow position: | chr10:65367014-65366750 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 77, 88 |
| Conread position: | 359-621 |
| Cow position: | chr10:62892505-62892245 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 162, 29 |
| Conread position: | 359-634 |
| Cow position: | chr10:23859855-23860147 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 159, 255 |
| Conread position: | 359-637 |
| Cow position: | chr10:51686569-51686849 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 170 |
| Conread position: | 371-625 |
| Cow position: | chr10:16732757-16732497 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 372-619 |
| Cow position: | chr10:40718032-40717777 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 372-638 |
| Cow position: | chr10:32912594-32912872 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 13, 235 |
| Conread position: | 379-634 |
| Cow position: | chr10:838161-838425 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 107 |
| Conread position: | 381-592 |
| Cow position: | chr10:34447353-34447564 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 31 |
| Conread position: | 388-638 |
| Cow position: | chr10:1036617-1036361 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 128, 53 |
| Conread position: | 391-540 |
| Cow position: | chr10:28856590-28856439 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 125 |
| Conread position: | 416-638 |
| Cow position: | chr10:12406707-12406491 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 196, 97 |
Show alignments to all cow chromosomes.