Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8004B15.5 |
| Conread position: | 44-181 |
| Cow position: | chr17:1952631-1952768 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-192 |
| Cow position: | chr17:17449557-17449405 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 326-637 |
| Cow position: | chr17:4879106-4879433 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 329-625 |
| Cow position: | chr17:1325162-1325455 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 6, 26 |
| Conread position: | 358-609 |
| Cow position: | chr17:1730184-1730449 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 29, 258 |
| Conread position: | 358-632 |
| Cow position: | chr17:21585687-21585404 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 358-634 |
| Cow position: | chr17:1756992-1756704 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 358-637 |
| Cow position: | chr17:1491210-1491501 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 27, 84 |
| Conread position: | 359-486 |
| Cow position: | chr17:34053762-34053889 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-645 |
| Cow position: | chr17:27302402-27302103 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 9, 225 |
| Conread position: | 360-620 |
| Cow position: | chr17:21591823-21591554 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 373-518 |
| Cow position: | chr17:24997404-24997259 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 373-598 |
| Cow position: | chr17:11072233-11072468 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 14, 93 |
| Conread position: | 373-621 |
| Cow position: | chr17:16359903-16360161 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 14, 126 |
| Conread position: | 375-519 |
| Cow position: | chr17:25148140-25147996 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 377-633 |
| Cow position: | chr17:25546275-25546006 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 8, 239 |
| Conread position: | 384-647 |
| Cow position: | chr17:38189943-38189676 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 135, 12 |
| Conread position: | 387-619 |
| Cow position: | chr17:891721-891479 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 131, 31 |
| Conread position: | 404-637 |
| Cow position: | chr17:15483763-15483523 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 110, 188 |
Show alignments to all cow chromosomes.