Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8004B15.5 |
| Conread position: | 44-214 |
| Cow position: | chr21:4939628-4939454 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 44-534 |
| Cow position: | chr21:41688335-41687848 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 336 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 45-220 |
| Cow position: | chr21:45310389-45310204 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 90-638 |
| Cow position: | chr21:8850766-8851328 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 364 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 130 |
| Conread position: | 327-504 |
| Cow position: | chr21:8614558-8614725 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 134, 13 |
| Conread position: | 331-520 |
| Cow position: | chr21:12898543-12898724 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 336-519 |
| Cow position: | chr21:41569504-41569319 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 16, 136 |
| Conread position: | 343-619 |
| Cow position: | chr21:7143704-7143431 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 358-519 |
| Cow position: | chr21:7074249-7074089 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 27, 72 |
| Conread position: | 358-554 |
| Cow position: | chr21:17933897-17933686 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 358-634 |
| Cow position: | chr21:24735458-24735164 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 27, 67 |
| Conread position: | 358-638 |
| Cow position: | chr21:16845279-16845004 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 27, 116 |
| Conread position: | 358-638 |
| Cow position: | chr21:20186259-20185962 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 358-638 |
| Cow position: | chr21:42475317-42475027 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 359-519 |
| Cow position: | chr21:6326731-6326570 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 159 |
| Conread position: | 359-637 |
| Cow position: | chr21:41532347-41532632 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 159, 64 |
| Conread position: | 368-644 |
| Cow position: | chr21:9207039-9206770 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 423-637 |
| Cow position: | chr21:1184770-1184549 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 92, 29 |
Show alignments to all cow chromosomes.