Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8004B15.5
        

               Conread position:
               38-178
               

               Cow position:
               chr22:14835651-14835792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               61-278
               

               Cow position:
               chr22:15935179-15935398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               57, 139
               

               Conread position:
               338-519
               

               Cow position:
               chr22:18185786-18185610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               358-620
               

               Cow position:
               chr22:17848573-17848829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 103
               

               Conread position:
               359-586
               

               Cow position:
               chr22:29050165-29049942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               17, 71
               

               Conread position:
               360-510
               

               Cow position:
               chr22:3469393-3469542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               360-519
               

               Cow position:
               chr22:18484651-18484807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               88, 44
               

               Conread position:
               360-551
               

               Cow position:
               chr22:48302136-48301941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               119, 17
               

               Conread position:
               372-621
               

               Cow position:
               chr22:31917394-31917653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               15, 110
               

               Conread position:
               377-625
               

               Cow position:
               chr22:3070173-3070431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               25, 55
               
Show alignments to all cow chromosomes.