Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8004B15.5
        

               Conread position:
               37-217
               

               Cow position:
               chr28:34760899-34761083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               45-218
               

               Cow position:
               chr28:11279809-11279628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 153
               

               Conread position:
               46-278
               

               Cow position:
               chr28:19226374-19226144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               11, 67
               

               Conread position:
               325-621
               

               Cow position:
               chr28:5414539-5414837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               193, 29
               

               Conread position:
               326-637
               

               Cow position:
               chr28:9792631-9792959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               237
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               7, 13
               

               Conread position:
               328-616
               

               Cow position:
               chr28:10695696-10695397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 149
               

               Conread position:
               358-617
               

               Cow position:
               chr28:18714278-18714550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               27, 257
               

               Conread position:
               359-519
               

               Cow position:
               chr28:10778977-10778823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               384-634
               

               Cow position:
               chr28:14483150-14482908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               409-637
               

               Cow position:
               chr28:34761307-34761543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               109, 203
               
Show alignments to all cow chromosomes.