Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8004B15.5
        

               Conread position:
               45-513
               

               Cow position:
               chr29:26644111-26644593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               326
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               129, 76
               

               Conread position:
               330-519
               

               Cow position:
               chr29:44696569-44696742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               5, 18
               

               Conread position:
               358-518
               

               Cow position:
               chr29:1627509-1627669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               358-642
               

               Cow position:
               chr29:24135527-24135808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               27, 134
               

               Conread position:
               358-644
               

               Cow position:
               chr29:13386954-13386660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 117
               

               Conread position:
               359-517
               

               Cow position:
               chr29:16336274-16336114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 115
               

               Conread position:
               360-551
               

               Cow position:
               chr29:1542169-1541962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 136
               

               Conread position:
               372-637
               

               Cow position:
               chr29:45620116-45619845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               378-646
               

               Cow position:
               chr29:38865469-38865728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               462-637
               

               Cow position:
               chr29:33557487-33557656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 0
               
Show alignments to all cow chromosomes.