Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8004B15.5 |
| Conread position: | 45-223 |
| Cow position: | chr3:59579520-59579342 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 136, 53 |
| Conread position: | 45-519 |
| Cow position: | chr3:36543420-36543880 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 61-638 |
| Cow position: | chr3:19236838-19236254 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 379 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 113, 36 |
| Conread position: | 326-638 |
| Cow position: | chr3:37255920-37256247 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 246 |
| Conread position: | 329-463 |
| Cow position: | chr3:18207058-18206925 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 6, 24 |
| Conread position: | 329-519 |
| Cow position: | chr3:33567817-33567998 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 329-619 |
| Cow position: | chr3:26586132-26586418 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 6, 25 |
| Conread position: | 329-620 |
| Cow position: | chr3:4126785-4127079 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 6, 25 |
| Conread position: | 335-637 |
| Cow position: | chr3:75076958-75077251 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 358-519 |
| Cow position: | chr3:58594733-58594570 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 358-625 |
| Cow position: | chr3:3643407-3643686 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 134 |
| Conread position: | 359-512 |
| Cow position: | chr3:34442693-34442841 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 359-593 |
| Cow position: | chr3:63270934-63270696 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 359-616 |
| Cow position: | chr3:22703126-22702867 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 154, 92 |
| Conread position: | 359-637 |
| Cow position: | chr3:7837434-7837711 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 156, 41 |
| Conread position: | 360-637 |
| Cow position: | chr3:28926138-28926409 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 362-619 |
| Cow position: | chr3:69220139-69220401 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 154, 71 |
| Conread position: | 392-621 |
| Cow position: | chr3:52026569-52026805 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 126, 39 |
Show alignments to all cow chromosomes.