Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8004B15.5
        

               Conread position:
               44-181
               

               Cow position:
               chr5:49633655-49633517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               45-212
               

               Cow position:
               chr5:12785618-12785447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               12, 79
               

               Conread position:
               45-519
               

               Cow position:
               chr5:24892998-24893462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 99
               

               Conread position:
               93-518
               

               Cow position:
               chr5:47960931-47960515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               290
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               84, 48
               

               Conread position:
               329-613
               

               Cow position:
               chr5:68391482-68391771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               6, 24
               

               Conread position:
               329-637
               

               Cow position:
               chr5:17044285-17043974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               6, 26
               

               Conread position:
               330-518
               

               Cow position:
               chr5:24886834-24887024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               359-637
               

               Cow position:
               chr5:46862496-46862210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               44, 37
               

               Conread position:
               405-638
               

               Cow position:
               chr5:43659797-43659558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               110, 198
               

               Conread position:
               425-638
               

               Cow position:
               chr5:67964558-67964778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               93, 75
               
Show alignments to all cow chromosomes.