Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8004B15.5
        

               Conread position:
               323-621
               

               Cow position:
               chr7:31117796-31118096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               198, 10
               

               Conread position:
               358-616
               

               Cow position:
               chr7:52896883-52896622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               27, 43
               

               Conread position:
               358-620
               

               Cow position:
               chr7:43870823-43870549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               27, 66
               

               Conread position:
               358-634
               

               Cow position:
               chr7:43899683-43899395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               27, 96
               

               Conread position:
               360-519
               

               Cow position:
               chr7:44938481-44938315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               94, 12
               

               Conread position:
               360-520
               

               Cow position:
               chr7:28335877-28336029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 17
               

               Conread position:
               372-611
               

               Cow position:
               chr7:26792442-26792678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 47
               

               Conread position:
               372-620
               

               Cow position:
               chr7:43568933-43569187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               372-637
               

               Cow position:
               chr7:3168727-3169006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               15, 177
               

               Conread position:
               385-637
               

               Cow position:
               chr7:43051637-43051895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               136, 48
               
Show alignments to all cow chromosomes.