Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8004B15.5 |
| Conread position: | 100-502 |
| Cow position: | chr9:31297398-31297797 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 138, 69 |
| Conread position: | 326-519 |
| Cow position: | chr9:3562426-3562244 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 329-637 |
| Cow position: | chr9:6134176-6133864 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 25 |
| Conread position: | 349-625 |
| Cow position: | chr9:9733499-9733212 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 51 |
| Conread position: | 358-616 |
| Cow position: | chr9:25574490-25574749 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 133 |
| Conread position: | 358-645 |
| Cow position: | chr9:10290428-10290132 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 27, 47 |
| Conread position: | 359-509 |
| Cow position: | chr9:5147584-5147430 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 360-637 |
| Cow position: | chr9:44609733-44610014 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 161, 38 |
| Conread position: | 372-611 |
| Cow position: | chr9:56294055-56294294 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 372-632 |
| Cow position: | chr9:21499787-21499524 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 41 |
| Conread position: | 374-621 |
| Cow position: | chr9:36396717-36396975 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 378-637 |
| Cow position: | chr9:6126998-6126738 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 405-639 |
| Cow position: | chr9:45406718-45406957 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 116, 49 |
| Conread position: | 416-621 |
| Cow position: | chr9:15223890-15223673 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 99, 49 |
Show alignments to all cow chromosomes.