Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8004C16.3.5
        

               Conread position:
               9-179
               

               Cow position:
               chr13:41829625-41829789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               142
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               176-366
               

               Cow position:
               chr13:41837546-41837736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               337-447
               

               Cow position:
               chr13:41839861-41839970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               443-634
               

               Cow position:
               chr13:41925093-41924902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               632-735
               

               Cow position:
               chr13:41924747-41924644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               734-877
               

               Cow position:
               chr13:41923721-41923578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               140
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               877-1064
               

               Cow position:
               chr13:41922773-41922586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1064-2076
               

               Cow position:
               chr13:41922329-41921286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               1060
               

               Alignm identity:
               860
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               447, 318
               
Show alignments to all cow chromosomes.