Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8004D12.3 |
| Conread position: | 309-666 |
| Cow position: | chr10:8996279-8995925 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 279 |
| Conread position: | 355-780 |
| Cow position: | chr10:9010626-9010202 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 279 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 382-835 |
| Cow position: | chr10:9031062-9031508 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 75, 62 |
| Conread position: | 386-741 |
| Cow position: | chr10:9031309-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 387-774 |
| Cow position: | chr10:21939015-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 170, 165 |
| Conread position: | 387-824 |
| Cow position: | chr10:9010511-9010072 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 284 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 249, 229 |
| Conread position: | 387-836 |
| Cow position: | chr10:8996783-8996333 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 429, 442 |
| Conread position: | 391-748 |
| Cow position: | chr10:8996359-8996002 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 240 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 248, 234 |
| Conread position: | 398-780 |
| Cow position: | chr10:8996688-8996306 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 402-831 |
| Cow position: | chr10:9031241-9031670 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 403-784 |
| Cow position: | chr10:8996851-8996470 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 215 |
| Conread position: | 404-825 |
| Cow position: | chr10:21939082-21938661 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 409-835 |
| Cow position: | chr10:8996509-8996081 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 0 |
| Conread position: | 409-873 |
| Cow position: | chr10:8996593-8996126 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 209 |
| Conread position: | 418-643 |
| Cow position: | chr10:9010060-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 209, 217 |
| Conread position: | 418-790 |
| Cow position: | chr10:21939152-21938780 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 307, 302 |
| Conread position: | 420-724 |
| Cow position: | chr10:9010142-9009838 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 428-813 |
| Cow position: | chr10:8996406-8996021 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 189 |
| Conread position: | 429-836 |
| Cow position: | chr10:9010301-9009892 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 203 |
| Conread position: | 432-811 |
| Cow position: | chr10:9010214-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 124, 120 |
| Conread position: | 432-835 |
| Cow position: | chr10:21939222-21938817 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 208, 195 |
| Conread position: | 432-870 |
| Cow position: | chr10:9010382-9009941 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 308, 288 |
| Conread position: | 453-841 |
| Cow position: | chr10:8996885-8996496 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 373 |
| Conread position: | 476-835 |
| Cow position: | chr10:9031231-9031592 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 68, 77 |
| Conread position: | 491-871 |
| Cow position: | chr10:9010575-9010192 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 139, 133 |
| Conread position: | 528-836 |
| Cow position: | chr10:8996894-8996585 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 108, 92 |
Show alignments to all cow chromosomes.