Cow genome map

Conread name: Ss1.1-Pig3-SRG8004D12.3

Conread position: 381-784
Cow position:
Alignm length: 406
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 259

Conread position: 381-814
Cow position:
Alignm length: 437
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 92

Conread position: 382-690
Cow position:
Alignm length: 310
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 154, 168

Conread position: 384-814
Cow position:
Alignm length: 431
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 384-836
Cow position:
Alignm length: 455
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 441

Conread position: 384-864
Cow position:
Alignm length: 486
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 340

Conread position: 384-870
Cow position:
Alignm length: 493
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 172

Conread position: 385-814
Cow position:
Alignm length: 430
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 386-709
Cow position:
Alignm length: 324
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 386-814
Cow position:
Alignm length: 432
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 232

Conread position: 387-800
Cow position:
Alignm length: 415
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 253

Conread position: 387-814
Cow position:
Alignm length: 429
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 169

Conread position: 387-815
Cow position:
Alignm length: 430
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 315

Conread position: 387-824
Cow position:
Alignm length: 441
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 253

Conread position: 387-830
Cow position:
Alignm length: 449
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 64

Conread position: 387-834
Cow position:
Alignm length: 449
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 436, 0

Conread position: 387-835
Cow position:
Alignm length: 451
Alignm identity: 274
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 427, 0

Conread position: 391-814
Cow position:
Alignm length: 426
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 159

Conread position: 391-873
Cow position:
Alignm length: 487
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 249

Conread position: 397-784
Cow position:
Alignm length: 388
Alignm identity: 245
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 398-836
Cow position:
Alignm length: 441
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 427

Conread position: 398-873
Cow position:
Alignm length: 483
Alignm identity: 302
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 174, 181

Conread position: 403-602
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 403-676
Cow position:
Alignm length: 274
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 403-778
Cow position:
Alignm length: 377
Alignm identity: 240
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 295, 321

Conread position: 403-780
Cow position:
Alignm length: 379
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 153

Conread position: 403-799
Cow position:
Alignm length: 399
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 147

Conread position: 403-802
Cow position:
Alignm length: 400
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 403-832
Cow position:
Alignm length: 432
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 0

Conread position: 403-835
Cow position:
Alignm length: 437
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 273

Conread position: 403-836
Cow position:
Alignm length: 438
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 11

Conread position: 405-812
Cow position:
Alignm length: 408
Alignm identity: 252
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 405-835
Cow position:
Alignm length: 434
Alignm identity: 266
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 328, 321

Conread position: 405-845
Cow position:
Alignm length: 443
Alignm identity: 272
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 398, 0

Conread position: 405-877
Cow position:
Alignm length: 476
Alignm identity: 283
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 418, 0

Conread position: 406-669
Cow position:
Alignm length: 265
Alignm identity: 176
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 406-838
Cow position:
Alignm length: 436
Alignm identity: 256
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 408, 427

Conread position: 409-814
Cow position:
Alignm length: 406
Alignm identity: 255
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 409-835
Cow position:
Alignm length: 430
Alignm identity: 271
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 384, 376

Conread position: 417-783
Cow position:
Alignm length: 370
Alignm identity: 233
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 223, 200

Conread position: 418-783
Cow position:
Alignm length: 366
Alignm identity: 240
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 418-877
Cow position:
Alignm length: 465
Alignm identity: 290
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 183, 176

Conread position: 420-751
Cow position:
Alignm length: 332
Alignm identity: 221
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 421-780
Cow position:
Alignm length: 360
Alignm identity: 232
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 421-781
Cow position:
Alignm length: 361
Alignm identity: 234
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 422-836
Cow position:
Alignm length: 416
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 0

Conread position: 423-814
Cow position:
Alignm length: 393
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 133

Conread position: 423-836
Cow position:
Alignm length: 416
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 402

Conread position: 429-755
Cow position:
Alignm length: 327
Alignm identity: 204
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 429-814
Cow position:
Alignm length: 386
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 429-870
Cow position:
Alignm length: 446
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 430

Conread position: 430-814
Cow position:
Alignm length: 386
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 210

Conread position: 432-780
Cow position:
Alignm length: 349
Alignm identity: 226
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 438-784
Cow position:
Alignm length: 347
Alignm identity: 208
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 438-790
Cow position:
Alignm length: 353
Alignm identity: 214
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 438-865
Cow position:
Alignm length: 434
Alignm identity: 267
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 189, 193

Conread position: 456-814
Cow position:
Alignm length: 359
Alignm identity: 230
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 459-814
Cow position:
Alignm length: 356
Alignm identity: 232
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 471-787
Cow position:
Alignm length: 318
Alignm identity: 205
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 231, 237

Conread position: 479-814
Cow position:
Alignm length: 338
Alignm identity: 213
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 150, 21

Conread position: 492-783
Cow position:
Alignm length: 292
Alignm identity: 186
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 492-830
Cow position:
Alignm length: 341
Alignm identity: 224
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 324, 330

Conread position: 495-876
Cow position:
Alignm length: 386
Alignm identity: 247
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 310, 300

Conread position: 507-869
Cow position:
Alignm length: 366
Alignm identity: 222
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 305, 0

Conread position: 571-787
Cow position:
Alignm length: 218
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 5

Show alignments to all cow chromosomes.