Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8004D12.3
        

               Conread position:
               17-918
               

               Cow position:
               
               

               Alignm length:
               906
               

               Alignm identity:
               753
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 452
               

               Conread position:
               300-700
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               271
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               70, 10
               

               Conread position:
               309-780
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               357-836
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 200
               

               Conread position:
               379-835
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 297
               

               Conread position:
               383-835
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               290
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               383-870
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               428, 0
               

               Conread position:
               386-613
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               386-646
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-664
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-697
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               214
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               240, 253
               

               Conread position:
               387-778
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-778
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               252
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-784
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 244
               

               Conread position:
               387-813
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               279
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               387-833
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 76
               

               Conread position:
               387-834
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               336, 81
               

               Conread position:
               387-835
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               337, 332
               

               Conread position:
               387-835
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               426, 0
               

               Conread position:
               387-835
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               429, 435
               

               Conread position:
               387-836
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               420, 409
               

               Conread position:
               387-836
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               415, 422
               

               Conread position:
               387-869
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               429, 172
               

               Conread position:
               391-709
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               391-800
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 322
               

               Conread position:
               392-784
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               257
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               248, 225
               

               Conread position:
               397-682
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               59, 54
               

               Conread position:
               398-644
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               62, 75
               

               Conread position:
               398-832
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               326, 131
               

               Conread position:
               399-873
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               309
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               23, 135
               

               Conread position:
               403-780
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               10, 72
               

               Conread position:
               403-783
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-783
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               403-814
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               259
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-824
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 228
               

               Conread position:
               403-835
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 147
               

               Conread position:
               405-748
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               405-812
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 226
               

               Conread position:
               405-836
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 213
               

               Conread position:
               405-873
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 133
               

               Conread position:
               406-780
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               406-784
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               11, 146
               

               Conread position:
               407-787
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               12, 235
               

               Conread position:
               407-835
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 228
               

               Conread position:
               408-780
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               408-783
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               39, 8
               

               Conread position:
               408-814
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 124
               

               Conread position:
               408-868
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               404, 166
               

               Conread position:
               409-780
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               409-813
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               409-835
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 147
               

               Conread position:
               419-870
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               330, 338
               

               Conread position:
               420-794
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               121, 115
               

               Conread position:
               420-830
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               371, 313
               

               Conread position:
               420-835
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               396, 0
               

               Conread position:
               420-890
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 197
               

               Conread position:
               421-748
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               313, 0
               

               Conread position:
               421-793
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               245
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               118, 111
               

               Conread position:
               421-814
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               127, 115
               

               Conread position:
               421-835
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               386, 375
               

               Conread position:
               421-835
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 198
               

               Conread position:
               421-836
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               392, 408
               

               Conread position:
               426-824
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               390, 63
               

               Conread position:
               428-824
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               379, 370
               

               Conread position:
               428-836
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               265
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               111, 122
               

               Conread position:
               429-769
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 120
               

               Conread position:
               429-814
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 244
               

               Conread position:
               429-815
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 290
               

               Conread position:
               429-832
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               201, 80
               

               Conread position:
               429-865
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               81, 85
               

               Conread position:
               429-890
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               295
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               387, 183
               

               Conread position:
               431-738
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               113, 119
               

               Conread position:
               431-812
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 186
               

               Conread position:
               431-835
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               385, 394
               

               Conread position:
               432-833
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 244
               

               Conread position:
               432-870
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               380, 0
               

               Conread position:
               443-814
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               460-864
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               253
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               7, 73
               

               Conread position:
               471-700
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               471-778
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               62, 70
               

               Conread position:
               471-841
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               352, 0
               

               Conread position:
               482-830
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               69, 13
               

               Conread position:
               490-835
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               491-835
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               325, 0
               
Show alignments to all cow chromosomes.