Cow genome map

Conread name: Ss1.1-Pig3-SRG8004D12.3

Conread position: 308-873
Cow position:
Alignm length: 575
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 371-882
Cow position:
Alignm length: 519
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 5

Conread position: 381-790
Cow position:
Alignm length: 410
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 385-751
Cow position:
Alignm length: 367
Alignm identity: 231
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 385-793
Cow position:
Alignm length: 409
Alignm identity: 256
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 386-748
Cow position:
Alignm length: 365
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 87

Conread position: 386-775
Cow position:
Alignm length: 390
Alignm identity: 251
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 386-783
Cow position:
Alignm length: 399
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 154

Conread position: 386-784
Cow position:
Alignm length: 401
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 12

Conread position: 386-814
Cow position:
Alignm length: 430
Alignm identity: 269
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 20, 12

Conread position: 386-814
Cow position:
Alignm length: 430
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 154

Conread position: 386-833
Cow position:
Alignm length: 450
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 0

Conread position: 386-833
Cow position:
Alignm length: 451
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 164

Conread position: 386-835
Cow position:
Alignm length: 453
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 164

Conread position: 386-835
Cow position:
Alignm length: 452
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 0

Conread position: 387-585
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 387-669
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 387-749
Cow position:
Alignm length: 365
Alignm identity: 237
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 75, 64

Conread position: 387-750
Cow position:
Alignm length: 365
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 32

Conread position: 387-750
Cow position:
Alignm length: 365
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 387-780
Cow position:
Alignm length: 394
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 387-783
Cow position:
Alignm length: 400
Alignm identity: 248
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 174, 158

Conread position: 387-783
Cow position:
Alignm length: 399
Alignm identity: 257
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 75, 64

Conread position: 387-787
Cow position:
Alignm length: 404
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 28

Conread position: 387-813
Cow position:
Alignm length: 431
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 21

Conread position: 387-814
Cow position:
Alignm length: 430
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 169

Conread position: 387-828
Cow position:
Alignm length: 446
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 323

Conread position: 387-833
Cow position:
Alignm length: 450
Alignm identity: 283
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 301, 318

Conread position: 387-833
Cow position:
Alignm length: 449
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 429, 0

Conread position: 387-835
Cow position:
Alignm length: 452
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 86

Conread position: 387-835
Cow position:
Alignm length: 452
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 155

Conread position: 387-835
Cow position:
Alignm length: 452
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 153

Conread position: 387-836
Cow position:
Alignm length: 453
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 323

Conread position: 387-836
Cow position:
Alignm length: 455
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 11

Conread position: 387-869
Cow position:
Alignm length: 488
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 9

Conread position: 387-873
Cow position:
Alignm length: 494
Alignm identity: 309
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 32, 27

Conread position: 388-748
Cow position:
Alignm length: 364
Alignm identity: 229
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 31

Conread position: 391-833
Cow position:
Alignm length: 446
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 425, 0

Conread position: 391-836
Cow position:
Alignm length: 450
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 129

Conread position: 398-751
Cow position:
Alignm length: 357
Alignm identity: 220
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 61

Conread position: 398-780
Cow position:
Alignm length: 387
Alignm identity: 239
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 59

Conread position: 402-833
Cow position:
Alignm length: 451
Alignm identity: 254
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 213, 0

Conread position: 403-706
Cow position:
Alignm length: 307
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 131

Conread position: 403-783
Cow position:
Alignm length: 390
Alignm identity: 248
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 10, 56

Conread position: 403-873
Cow position:
Alignm length: 474
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 0

Conread position: 404-841
Cow position:
Alignm length: 441
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 423

Conread position: 404-841
Cow position:
Alignm length: 442
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 21

Conread position: 405-587
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 57

Conread position: 405-674
Cow position:
Alignm length: 272
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 9

Conread position: 405-751
Cow position:
Alignm length: 347
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 405-776
Cow position:
Alignm length: 372
Alignm identity: 235
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 405-788
Cow position:
Alignm length: 385
Alignm identity: 244
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 215, 235

Conread position: 405-835
Cow position:
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 410, 0

Conread position: 405-835
Cow position:
Alignm length: 434
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 393

Conread position: 405-835
Cow position:
Alignm length: 434
Alignm identity: 273
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 296, 315

Conread position: 407-836
Cow position:
Alignm length: 434
Alignm identity: 275
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 255, 421

Conread position: 409-747
Cow position:
Alignm length: 339
Alignm identity: 218
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 409-751
Cow position:
Alignm length: 344
Alignm identity: 229
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 221, 214

Conread position: 409-775
Cow position:
Alignm length: 367
Alignm identity: 230
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 409-788
Cow position:
Alignm length: 384
Alignm identity: 231
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 52

Conread position: 409-833
Cow position:
Alignm length: 428
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 0

Conread position: 409-836
Cow position:
Alignm length: 435
Alignm identity: 283
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 147, 134

Conread position: 411-668
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 8, 0

Conread position: 418-788
Cow position:
Alignm length: 374
Alignm identity: 234
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 77

Conread position: 420-751
Cow position:
Alignm length: 334
Alignm identity: 221
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 46, 39

Conread position: 420-760
Cow position:
Alignm length: 345
Alignm identity: 217
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 37

Conread position: 420-775
Cow position:
Alignm length: 356
Alignm identity: 232
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 420-780
Cow position:
Alignm length: 366
Alignm identity: 236
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 136, 115

Conread position: 420-793
Cow position:
Alignm length: 374
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 420-793
Cow position:
Alignm length: 374
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 420-828
Cow position:
Alignm length: 412
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 0

Conread position: 420-834
Cow position:
Alignm length: 423
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 39

Conread position: 420-870
Cow position:
Alignm length: 454
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 0

Conread position: 421-705
Cow position:
Alignm length: 285
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 421-775
Cow position:
Alignm length: 355
Alignm identity: 231
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 421-784
Cow position:
Alignm length: 366
Alignm identity: 231
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 217, 196

Conread position: 421-824
Cow position:
Alignm length: 406
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 0

Conread position: 421-824
Cow position:
Alignm length: 406
Alignm identity: 264
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 395, 68

Conread position: 421-836
Cow position:
Alignm length: 419
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 375

Conread position: 428-814
Cow position:
Alignm length: 388
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 367

Conread position: 428-814
Cow position:
Alignm length: 387
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 428-833
Cow position:
Alignm length: 408
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 0

Conread position: 429-772
Cow position:
Alignm length: 344
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 429-780
Cow position:
Alignm length: 352
Alignm identity: 232
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 429-783
Cow position:
Alignm length: 355
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 429-788
Cow position:
Alignm length: 362
Alignm identity: 237
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 28

Conread position: 429-814
Cow position:
Alignm length: 387
Alignm identity: 229
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 260, 278

Conread position: 429-833
Cow position:
Alignm length: 408
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 378

Conread position: 429-833
Cow position:
Alignm length: 408
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 315

Conread position: 429-835
Cow position:
Alignm length: 411
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 198

Conread position: 429-866
Cow position:
Alignm length: 445
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 294

Conread position: 430-661
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 430-783
Cow position:
Alignm length: 354
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 430-784
Cow position:
Alignm length: 355
Alignm identity: 212
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 432-771
Cow position:
Alignm length: 343
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 144, 139

Conread position: 432-775
Cow position:
Alignm length: 344
Alignm identity: 221
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 432-786
Cow position:
Alignm length: 359
Alignm identity: 222
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 100

Conread position: 432-787
Cow position:
Alignm length: 357
Alignm identity: 219
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 103, 112

Conread position: 432-788
Cow position:
Alignm length: 361
Alignm identity: 231
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 268, 284

Conread position: 432-800
Cow position:
Alignm length: 373
Alignm identity: 237
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 30

Conread position: 432-835
Cow position:
Alignm length: 407
Alignm identity: 261
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 369, 375

Conread position: 432-871
Cow position:
Alignm length: 446
Alignm identity: 278
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 214, 202

Conread position: 438-784
Cow position:
Alignm length: 349
Alignm identity: 214
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 26

Conread position: 438-835
Cow position:
Alignm length: 400
Alignm identity: 258
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 378, 0

Conread position: 456-870
Cow position:
Alignm length: 423
Alignm identity: 268
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 39, 33

Conread position: 461-835
Cow position:
Alignm length: 377
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 0

Conread position: 471-825
Cow position:
Alignm length: 358
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 330, 336

Conread position: 471-833
Cow position:
Alignm length: 366
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 362

Conread position: 474-709
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 476-681
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 154, 141

Conread position: 480-783
Cow position:
Alignm length: 308
Alignm identity: 195
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 54

Conread position: 489-836
Cow position:
Alignm length: 352
Alignm identity: 226
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 141, 128

Conread position: 495-826
Cow position:
Alignm length: 335
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 0

Conread position: 495-872
Cow position:
Alignm length: 382
Alignm identity: 251
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 306, 79

Conread position: 500-775
Cow position:
Alignm length: 278
Alignm identity: 177
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 138, 125

Conread position: 500-790
Cow position:
Alignm length: 292
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 154, 167

Conread position: 501-736
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 217, 209

Conread position: 501-836
Cow position:
Alignm length: 339
Alignm identity: 228
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 43, 51

Conread position: 527-828
Cow position:
Alignm length: 307
Alignm identity: 196
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 46

Conread position: 546-813
Cow position:
Alignm length: 269
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 178, 171

Conread position: 556-794
Cow position:
Alignm length: 239
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.