Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8004D12.3 |
| Conread position: | 363-873 |
| Cow position: | chr24:17078222-17077709 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 356 |
| Conread position: | 372-754 |
| Cow position: | chr24:17070676-17071058 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 376, 5 |
| Conread position: | 379-814 |
| Cow position: | chr24:17077954-17077519 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 255 |
| Conread position: | 387-675 |
| Cow position: | chr24:17070774-17071062 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-751 |
| Cow position: | chr24:17035391-17035027 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 387-833 |
| Cow position: | chr24:17070522-17070970 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 323 |
| Conread position: | 387-840 |
| Cow position: | chr24:17035643-17035188 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 429, 0 |
| Conread position: | 387-870 |
| Cow position: | chr24:17035895-17035409 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 299 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 284, 289 |
| Conread position: | 390-770 |
| Cow position: | chr24:17013146-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 0 |
| Conread position: | 399-891 |
| Cow position: | chr24:17036554-17036058 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 413, 11 |
| Conread position: | 400-824 |
| Cow position: | chr24:17070367-17070793 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 403-891 |
| Cow position: | chr24:17035711-17035218 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 413, 0 |
| Conread position: | 408-623 |
| Cow position: | chr24:16986430-16986645 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 409-831 |
| Cow position: | chr24:17078008-17077584 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 143 |
| Conread position: | 409-883 |
| Cow position: | chr24:17078092-17077615 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 224 |
| Conread position: | 411-810 |
| Cow position: | chr24:17036375-17035976 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-836 |
| Cow position: | chr24:17070462-17070888 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 346 |
| Conread position: | 418-738 |
| Cow position: | chr24:17077831-17077511 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 134 |
| Conread position: | 421-814 |
| Cow position: | chr24:17035945-17035552 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 114 |
| Conread position: | 421-835 |
| Cow position: | chr24:17036113-17035697 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 255 |
| Conread position: | 421-865 |
| Cow position: | chr24:17036281-17035834 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 255 |
| Conread position: | 428-814 |
| Cow position: | chr24:17070647-17071033 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 432-784 |
| Cow position: | chr24:17035430-17035078 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 186 |
| Conread position: | 436-873 |
| Cow position: | chr24:17035762-17035322 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 380, 0 |
| Conread position: | 437-814 |
| Cow position: | chr24:17035509-17035132 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 443-870 |
| Cow position: | chr24:17078394-17077964 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 305, 314 |
| Conread position: | 444-840 |
| Cow position: | chr24:17036006-17035608 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 0 |
| Conread position: | 463-857 |
| Cow position: | chr24:17036155-17035759 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 0 |
| Conread position: | 475-812 |
| Cow position: | chr24:17013147-17013484 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 490-709 |
| Cow position: | chr24:16986428-16986647 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 559-873 |
| Cow position: | chr24:17013147-17013464 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 162, 153 |
Show alignments to all cow chromosomes.