Cow genome map

Conread name: Ss1.1-Pig3-SRG8004D12.3

Conread position: 306-871
Cow position:
Alignm length: 575
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 307-836
Cow position:
Alignm length: 539
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 65

Conread position: 307-873
Cow position:
Alignm length: 579
Alignm identity: 351
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 32

Conread position: 309-835
Cow position:
Alignm length: 535
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 310-776
Cow position:
Alignm length: 469
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 389

Conread position: 326-748
Cow position:
Alignm length: 426
Alignm identity: 268
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 0

Conread position: 357-664
Cow position:
Alignm length: 315
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 261

Conread position: 357-799
Cow position:
Alignm length: 451
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 371-784
Cow position:
Alignm length: 420
Alignm identity: 271
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 7, 90

Conread position: 379-752
Cow position:
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 15

Conread position: 379-777
Cow position:
Alignm length: 400
Alignm identity: 262
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 177, 173

Conread position: 383-835
Cow position:
Alignm length: 456
Alignm identity: 279
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 418, 442

Conread position: 384-780
Cow position:
Alignm length: 397
Alignm identity: 252
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 385-709
Cow position:
Alignm length: 326
Alignm identity: 209
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 244, 251

Conread position: 385-873
Cow position:
Alignm length: 493
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 69

Conread position: 386-692
Cow position:
Alignm length: 309
Alignm identity: 207
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 154, 146

Conread position: 386-776
Cow position:
Alignm length: 394
Alignm identity: 244
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 25

Conread position: 386-814
Cow position:
Alignm length: 429
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 386-814
Cow position:
Alignm length: 430
Alignm identity: 262
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 170, 31

Conread position: 386-835
Cow position:
Alignm length: 453
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 76

Conread position: 387-616
Cow position:
Alignm length: 230
Alignm identity: 152
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 387-698
Cow position:
Alignm length: 314
Alignm identity: 208
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 130, 61

Conread position: 387-748
Cow position:
Alignm length: 362
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 387-780
Cow position:
Alignm length: 397
Alignm identity: 262
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 214, 146

Conread position: 387-780
Cow position:
Alignm length: 395
Alignm identity: 250
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 320, 61

Conread position: 387-795
Cow position:
Alignm length: 411
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 376

Conread position: 387-799
Cow position:
Alignm length: 414
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 247

Conread position: 387-800
Cow position:
Alignm length: 415
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 276

Conread position: 387-811
Cow position:
Alignm length: 426
Alignm identity: 257
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 180, 165

Conread position: 387-811
Cow position:
Alignm length: 425
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 387-814
Cow position:
Alignm length: 429
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 253

Conread position: 387-835
Cow position:
Alignm length: 452
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 420

Conread position: 387-835
Cow position:
Alignm length: 451
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 429, 0

Conread position: 387-836
Cow position:
Alignm length: 455
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 11

Conread position: 387-838
Cow position:
Alignm length: 455
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 289

Conread position: 390-701
Cow position:
Alignm length: 312
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 391-614
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 391-751
Cow position:
Alignm length: 371
Alignm identity: 232
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 20

Conread position: 391-780
Cow position:
Alignm length: 390
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 391-814
Cow position:
Alignm length: 424
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 392-835
Cow position:
Alignm length: 446
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 420, 120

Conread position: 393-645
Cow position:
Alignm length: 254
Alignm identity: 163
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 40

Conread position: 398-835
Cow position:
Alignm length: 440
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 0

Conread position: 400-739
Cow position:
Alignm length: 343
Alignm identity: 220
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 7, 150

Conread position: 400-799
Cow position:
Alignm length: 403
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 318

Conread position: 402-691
Cow position:
Alignm length: 291
Alignm identity: 193
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 8, 0

Conread position: 403-692
Cow position:
Alignm length: 292
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 136, 153

Conread position: 403-709
Cow position:
Alignm length: 314
Alignm identity: 209
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 159

Conread position: 403-748
Cow position:
Alignm length: 351
Alignm identity: 228
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 31, 24

Conread position: 403-748
Cow position:
Alignm length: 347
Alignm identity: 223
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 321, 316

Conread position: 403-748
Cow position:
Alignm length: 347
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 316

Conread position: 403-752
Cow position:
Alignm length: 352
Alignm identity: 233
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 321, 316

Conread position: 403-776
Cow position:
Alignm length: 375
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 316

Conread position: 403-780
Cow position:
Alignm length: 380
Alignm identity: 239
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 64, 75

Conread position: 403-800
Cow position:
Alignm length: 398
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 403-813
Cow position:
Alignm length: 412
Alignm identity: 262
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 305, 301

Conread position: 403-835
Cow position:
Alignm length: 437
Alignm identity: 282
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 364, 89

Conread position: 403-835
Cow position:
Alignm length: 438
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 8

Conread position: 404-752
Cow position:
Alignm length: 352
Alignm identity: 217
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 76

Conread position: 404-776
Cow position:
Alignm length: 376
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 219

Conread position: 404-780
Cow position:
Alignm length: 378
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 226

Conread position: 405-675
Cow position:
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 196, 189

Conread position: 405-869
Cow position:
Alignm length: 473
Alignm identity: 293
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 14, 9

Conread position: 405-883
Cow position:
Alignm length: 482
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 0

Conread position: 406-751
Cow position:
Alignm length: 346
Alignm identity: 224
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 406-873
Cow position:
Alignm length: 473
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 421

Conread position: 407-836
Cow position:
Alignm length: 435
Alignm identity: 269
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 114, 125

Conread position: 407-873
Cow position:
Alignm length: 473
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 420

Conread position: 408-661
Cow position:
Alignm length: 254
Alignm identity: 167
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 408-795
Cow position:
Alignm length: 390
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 349

Conread position: 408-873
Cow position:
Alignm length: 470
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 74

Conread position: 409-612
Cow position:
Alignm length: 204
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 409-825
Cow position:
Alignm length: 421
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 181

Conread position: 409-830
Cow position:
Alignm length: 425
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 0

Conread position: 417-751
Cow position:
Alignm length: 336
Alignm identity: 206
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 123, 138

Conread position: 418-784
Cow position:
Alignm length: 369
Alignm identity: 230
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 217, 196

Conread position: 418-812
Cow position:
Alignm length: 395
Alignm identity: 253
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 418-863
Cow position:
Alignm length: 452
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 301

Conread position: 420-750
Cow position:
Alignm length: 333
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 53

Conread position: 420-780
Cow position:
Alignm length: 361
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 420-814
Cow position:
Alignm length: 398
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 196

Conread position: 421-711
Cow position:
Alignm length: 291
Alignm identity: 203
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 287, 0

Conread position: 421-736
Cow position:
Alignm length: 318
Alignm identity: 204
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 89, 94

Conread position: 421-812
Cow position:
Alignm length: 393
Alignm identity: 232
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 226, 202

Conread position: 421-813
Cow position:
Alignm length: 394
Alignm identity: 243
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 173, 179

Conread position: 421-833
Cow position:
Alignm length: 420
Alignm identity: 263
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 215, 194

Conread position: 422-813
Cow position:
Alignm length: 394
Alignm identity: 256
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 11, 218

Conread position: 423-851
Cow position:
Alignm length: 432
Alignm identity: 261
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 393, 0

Conread position: 428-795
Cow position:
Alignm length: 369
Alignm identity: 235
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 227, 61

Conread position: 428-814
Cow position:
Alignm length: 390
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 48

Conread position: 429-697
Cow position:
Alignm length: 270
Alignm identity: 174
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 261, 0

Conread position: 429-746
Cow position:
Alignm length: 319
Alignm identity: 209
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 114, 126

Conread position: 429-754
Cow position:
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 429-775
Cow position:
Alignm length: 347
Alignm identity: 226
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 429-776
Cow position:
Alignm length: 350
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 187

Conread position: 429-812
Cow position:
Alignm length: 384
Alignm identity: 226
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 429-813
Cow position:
Alignm length: 386
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 287

Conread position: 429-824
Cow position:
Alignm length: 399
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 290

Conread position: 429-835
Cow position:
Alignm length: 411
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 188

Conread position: 429-876
Cow position:
Alignm length: 451
Alignm identity: 281
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 385, 0

Conread position: 430-815
Cow position:
Alignm length: 387
Alignm identity: 241
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 370, 366

Conread position: 431-775
Cow position:
Alignm length: 346
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 120

Conread position: 432-707
Cow position:
Alignm length: 276
Alignm identity: 178
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 432-747
Cow position:
Alignm length: 319
Alignm identity: 205
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 90, 102

Conread position: 432-814
Cow position:
Alignm length: 383
Alignm identity: 235
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 432-873
Cow position:
Alignm length: 446
Alignm identity: 266
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 391, 182

Conread position: 441-812
Cow position:
Alignm length: 372
Alignm identity: 232
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 451-676
Cow position:
Alignm length: 226
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 455-696
Cow position:
Alignm length: 242
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 455-776
Cow position:
Alignm length: 324
Alignm identity: 221
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 174, 161

Conread position: 457-831
Cow position:
Alignm length: 376
Alignm identity: 239
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 266, 260

Conread position: 460-669
Cow position:
Alignm length: 210
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 460-783
Cow position:
Alignm length: 324
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 460-793
Cow position:
Alignm length: 334
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 463-819
Cow position:
Alignm length: 361
Alignm identity: 234
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 283, 110

Conread position: 468-761
Cow position:
Alignm length: 295
Alignm identity: 184
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 173, 165

Conread position: 470-783
Cow position:
Alignm length: 314
Alignm identity: 192
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 471-687
Cow position:
Alignm length: 221
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 33

Conread position: 471-698
Cow position:
Alignm length: 228
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 471-739
Cow position:
Alignm length: 270
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 253, 246

Conread position: 471-775
Cow position:
Alignm length: 305
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 471-776
Cow position:
Alignm length: 306
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 471-809
Cow position:
Alignm length: 339
Alignm identity: 214
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 471-872
Cow position:
Alignm length: 405
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 0

Conread position: 487-814
Cow position:
Alignm length: 328
Alignm identity: 219
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 489-784
Cow position:
Alignm length: 296
Alignm identity: 197
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 191, 0

Conread position: 491-750
Cow position:
Alignm length: 260
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 491-775
Cow position:
Alignm length: 288
Alignm identity: 190
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 187, 193

Conread position: 491-814
Cow position:
Alignm length: 327
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 23

Conread position: 491-834
Cow position:
Alignm length: 348
Alignm identity: 220
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 115, 126

Conread position: 492-776
Cow position:
Alignm length: 285
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 492-817
Cow position:
Alignm length: 326
Alignm identity: 214
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 493-745
Cow position:
Alignm length: 253
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 493-814
Cow position:
Alignm length: 326
Alignm identity: 214
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 19

Conread position: 494-783
Cow position:
Alignm length: 293
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 135, 122

Conread position: 494-784
Cow position:
Alignm length: 292
Alignm identity: 183
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 83, 77

Conread position: 495-783
Cow position:
Alignm length: 290
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 502-780
Cow position:
Alignm length: 282
Alignm identity: 180
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 156

Conread position: 504-865
Cow position:
Alignm length: 366
Alignm identity: 245
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 12, 27

Conread position: 504-870
Cow position:
Alignm length: 371
Alignm identity: 245
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 298, 303

Conread position: 507-785
Cow position:
Alignm length: 279
Alignm identity: 184
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 510-873
Cow position:
Alignm length: 368
Alignm identity: 241
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 56, 9

Conread position: 537-835
Cow position:
Alignm length: 303
Alignm identity: 207
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 99, 83

Conread position: 545-870
Cow position:
Alignm length: 330
Alignm identity: 207
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 269, 112

Conread position: 569-837
Cow position:
Alignm length: 272
Alignm identity: 181
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 248, 265

Conread position: 573-841
Cow position:
Alignm length: 272
Alignm identity: 178
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 189, 161

Conread position: 591-814
Cow position:
Alignm length: 224
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.