Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8004D12.3 |
| Conread position: | 306-871 |
| Cow position: | chr25:33298959-33299533 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 307-836 |
| Cow position: | chr25:33157328-33156792 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 65 |
| Conread position: | 307-873 |
| Cow position: | chr25:25652669-25653244 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 351 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 309-835 |
| Cow position: | chr25:33298626-33299160 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 310-776 |
| Cow position: | chr25:34732706-34732239 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 389 |
| Conread position: | 326-748 |
| Cow position: | chr25:34734094-34733669 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 357-664 |
| Cow position: | chr25:326950-327263 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 261 |
| Conread position: | 357-799 |
| Cow position: | chr25:25652299-25652747 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 371-784 |
| Cow position: | chr25:25652567-25652984 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 271 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 7, 90 |
| Conread position: | 379-752 |
| Cow position: | chr25:33127857-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 379-777 |
| Cow position: | chr25:36801106-36801492 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 262 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 177, 173 |
| Conread position: | 383-835 |
| Cow position: | chr25:36801350-36801804 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 418, 442 |
| Conread position: | 384-780 |
| Cow position: | chr25:36800523-36800919 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 385-709 |
| Cow position: | chr25:22235974-22236298 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 244, 251 |
| Conread position: | 385-873 |
| Cow position: | chr25:33157496-33157005 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 386-692 |
| Cow position: | chr25:36801029-36801335 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 154, 146 |
| Conread position: | 386-776 |
| Cow position: | chr25:33305820-33305433 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 386-814 |
| Cow position: | chr25:33127780-33128208 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-814 |
| Cow position: | chr25:34763311-34763733 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 262 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 170, 31 |
| Conread position: | 386-835 |
| Cow position: | chr25:33298625-33299076 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 76 |
| Conread position: | 387-616 |
| Cow position: | chr25:23420614-23420843 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-698 |
| Cow position: | chr25:33305172-33304866 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 130, 61 |
| Conread position: | 387-748 |
| Cow position: | chr25:23420446-23420807 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-780 |
| Cow position: | chr25:33305256-33304868 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 214, 146 |
| Conread position: | 387-780 |
| Cow position: | chr25:33305901-33305514 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 320, 61 |
| Conread position: | 387-795 |
| Cow position: | chr25:34769641-34769233 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 376 |
| Conread position: | 387-799 |
| Cow position: | chr25:33299298-33299710 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 247 |
| Conread position: | 387-800 |
| Cow position: | chr25:34447253-34447666 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 276 |
| Conread position: | 387-811 |
| Cow position: | chr25:34713845-34714269 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 180, 165 |
| Conread position: | 387-811 |
| Cow position: | chr25:34769977-34769553 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-814 |
| Cow position: | chr25:33299130-33299557 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 253 |
| Conread position: | 387-835 |
| Cow position: | chr25:33157410-33156960 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 414, 420 |
| Conread position: | 387-835 |
| Cow position: | chr25:34770061-34769611 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 429, 0 |
| Conread position: | 387-836 |
| Cow position: | chr25:34447001-34447451 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 387-838 |
| Cow position: | chr25:36800694-36801147 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 289 |
| Conread position: | 390-701 |
| Cow position: | chr25:34769553-34769243 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 391-614 |
| Cow position: | chr25:33306314-33306097 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 391-751 |
| Cow position: | chr25:326648-327014 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 391-780 |
| Cow position: | chr25:36801442-36801831 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 391-814 |
| Cow position: | chr25:33298798-33299221 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 392-835 |
| Cow position: | chr25:33144917-33145359 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 120 |
| Conread position: | 393-645 |
| Cow position: | chr25:346601-346853 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 40 |
| Conread position: | 398-835 |
| Cow position: | chr25:33127708-33128147 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 414, 0 |
| Conread position: | 400-739 |
| Cow position: | chr25:34714192-34714533 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 7, 150 |
| Conread position: | 400-799 |
| Cow position: | chr25:22235903-22236304 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 318 |
| Conread position: | 402-691 |
| Cow position: | chr25:326490-326780 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 403-692 |
| Cow position: | chr25:33305723-33305433 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 136, 153 |
| Conread position: | 403-709 |
| Cow position: | chr25:18642178-18641867 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 159 |
| Conread position: | 403-748 |
| Cow position: | chr25:326918-327263 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 403-748 |
| Cow position: | chr25:33299482-33299827 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 321, 316 |
| Conread position: | 403-748 |
| Cow position: | chr25:36801622-36801967 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 316 |
| Conread position: | 403-752 |
| Cow position: | chr25:33299230-33299580 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 233 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 321, 316 |
| Conread position: | 403-776 |
| Cow position: | chr25:33298894-33299267 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 316 |
| Conread position: | 403-780 |
| Cow position: | chr25:33306052-33305682 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 64, 75 |
| Conread position: | 403-800 |
| Cow position: | chr25:23420378-23420775 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 403-813 |
| Cow position: | chr25:36800878-36801288 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 305, 301 |
| Conread position: | 403-835 |
| Cow position: | chr25:33305407-33304977 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 282 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 364, 89 |
| Conread position: | 403-835 |
| Cow position: | chr25:34770129-34769695 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 8 |
| Conread position: | 404-752 |
| Cow position: | chr25:34433683-34434030 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 15, 76 |
| Conread position: | 404-776 |
| Cow position: | chr25:36800795-36801167 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 219 |
| Conread position: | 404-780 |
| Cow position: | chr25:33298475-33298851 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 226 |
| Conread position: | 405-675 |
| Cow position: | chr25:33127967-33128237 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 196, 189 |
| Conread position: | 405-869 |
| Cow position: | chr25:3663928-3664395 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 293 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 9 |
| Conread position: | 405-883 |
| Cow position: | chr25:33157308-33156827 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 407, 0 |
| Conread position: | 406-751 |
| Cow position: | chr25:414775-414439 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 406-873 |
| Cow position: | chr25:34769875-34769404 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 421 |
| Conread position: | 407-836 |
| Cow position: | chr25:326328-326758 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 114, 125 |
| Conread position: | 407-873 |
| Cow position: | chr25:34446935-34447406 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 420 |
| Conread position: | 408-661 |
| Cow position: | chr25:427329-427582 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 408-795 |
| Cow position: | chr25:34447356-34447743 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 349 |
| Conread position: | 408-873 |
| Cow position: | chr25:34446854-34447322 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 74 |
| Conread position: | 409-612 |
| Cow position: | chr25:34433021-34433224 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 409-825 |
| Cow position: | chr25:34447525-34447934 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 181 |
| Conread position: | 409-830 |
| Cow position: | chr25:34447107-34447531 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 402, 0 |
| Conread position: | 417-751 |
| Cow position: | chr25:34473684-34474015 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 123, 138 |
| Conread position: | 418-784 |
| Cow position: | chr25:34763256-34763619 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 217, 196 |
| Conread position: | 418-812 |
| Cow position: | chr25:25652450-25652844 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 253 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 418-863 |
| Cow position: | chr25:25652954-25653403 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 301 |
| Conread position: | 420-750 |
| Cow position: | chr25:33157041-33156712 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 53 |
| Conread position: | 420-780 |
| Cow position: | chr25:33298575-33298935 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 420-814 |
| Cow position: | chr25:36800643-36801037 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 196 |
| Conread position: | 421-711 |
| Cow position: | chr25:23420564-23420853 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 287, 0 |
| Conread position: | 421-736 |
| Cow position: | chr25:366738-367053 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 89, 94 |
| Conread position: | 421-812 |
| Cow position: | chr25:34713795-34714186 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 226, 202 |
| Conread position: | 421-813 |
| Cow position: | chr25:346461-346853 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 173, 179 |
| Conread position: | 421-833 |
| Cow position: | chr25:34714047-34714462 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 215, 194 |
| Conread position: | 422-813 |
| Cow position: | chr25:33145027-33145419 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 256 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 11, 218 |
| Conread position: | 423-851 |
| Cow position: | chr25:4657450-4657019 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 393, 0 |
| Conread position: | 428-795 |
| Cow position: | chr25:34433544-34433907 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 227, 61 |
| Conread position: | 428-814 |
| Cow position: | chr25:23420319-23420705 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 429-697 |
| Cow position: | chr25:34732503-34732234 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 261, 0 |
| Conread position: | 429-746 |
| Cow position: | chr25:33145119-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 114, 126 |
| Conread position: | 429-754 |
| Cow position: | chr25:33157116-33156791 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 429-775 |
| Cow position: | chr25:36801564-36801910 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 429-776 |
| Cow position: | chr25:36800988-36801335 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 187 |
| Conread position: | 429-812 |
| Cow position: | chr25:3636541-3636158 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 429-813 |
| Cow position: | chr25:34447211-34447595 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 287 |
| Conread position: | 429-824 |
| Cow position: | chr25:34769767-34769370 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 290 |
| Conread position: | 429-835 |
| Cow position: | chr25:34769683-34769275 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 188 |
| Conread position: | 429-876 |
| Cow position: | chr25:25652293-25652743 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 281 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 385, 0 |
| Conread position: | 430-815 |
| Cow position: | chr25:34714140-34714525 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 370, 366 |
| Conread position: | 431-775 |
| Cow position: | chr25:33299426-33299770 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 120 |
| Conread position: | 432-707 |
| Cow position: | chr25:326605-326880 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 432-747 |
| Cow position: | chr25:34732080-34731764 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 90, 102 |
| Conread position: | 432-814 |
| Cow position: | chr25:34763021-34763400 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 432-873 |
| Cow position: | chr25:34762937-34763378 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 391, 182 |
| Conread position: | 441-812 |
| Cow position: | chr25:25652557-25652928 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 451-676 |
| Cow position: | chr25:36844577-36844352 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 455-696 |
| Cow position: | chr25:34432983-34433224 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 455-776 |
| Cow position: | chr25:36801338-36801659 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 174, 161 |
| Conread position: | 457-831 |
| Cow position: | chr25:326462-326835 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 266, 260 |
| Conread position: | 460-669 |
| Cow position: | chr25:34762881-34763090 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 460-783 |
| Cow position: | chr25:34770156-34769833 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 460-793 |
| Cow position: | chr25:33157505-33157172 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 463-819 |
| Cow position: | chr25:34433495-34433850 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 283, 110 |
| Conread position: | 468-761 |
| Cow position: | chr25:36844644-36844351 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 173, 165 |
| Conread position: | 470-783 |
| Cow position: | chr25:3676054-3676367 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 471-687 |
| Cow position: | chr25:34412516-34412298 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 81, 33 |
| Conread position: | 471-698 |
| Cow position: | chr25:33306318-33306097 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 471-739 |
| Cow position: | chr25:34763474-34763742 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 253, 246 |
| Conread position: | 471-775 |
| Cow position: | chr25:22235892-22236196 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 471-776 |
| Cow position: | chr25:34763141-34763446 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 471-809 |
| Cow position: | chr25:25652923-25653261 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 471-872 |
| Cow position: | chr25:25652251-25652655 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 0 |
| Conread position: | 487-814 |
| Cow position: | chr25:34732613-34732286 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 489-784 |
| Cow position: | chr25:33144846-33145138 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 491-750 |
| Cow position: | chr25:34762828-34763087 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-775 |
| Cow position: | chr25:346447-346731 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 187, 193 |
| Conread position: | 491-814 |
| Cow position: | chr25:366724-367047 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 491-834 |
| Cow position: | chr25:34732105-34731760 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 115, 126 |
| Conread position: | 492-776 |
| Cow position: | chr25:3675992-3676276 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 492-817 |
| Cow position: | chr25:25652188-25652513 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-745 |
| Cow position: | chr25:427330-427582 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-814 |
| Cow position: | chr25:326924-327245 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 494-783 |
| Cow position: | chr25:4657463-4657174 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 135, 122 |
| Conread position: | 494-784 |
| Cow position: | chr25:34473509-34473799 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 83, 77 |
| Conread position: | 495-783 |
| Cow position: | chr25:22235831-22236120 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 502-780 |
| Cow position: | chr25:34433216-34433494 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 156 |
| Conread position: | 504-865 |
| Cow position: | chr25:33157545-33157181 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 245 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 504-870 |
| Cow position: | chr25:23420311-23420680 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 298, 303 |
| Conread position: | 507-785 |
| Cow position: | chr25:34733994-34733716 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 510-873 |
| Cow position: | chr25:33127653-33128018 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 537-835 |
| Cow position: | chr25:34770163-34769863 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 99, 83 |
| Conread position: | 545-870 |
| Cow position: | chr25:34433493-34433818 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 269, 112 |
| Conread position: | 569-837 |
| Cow position: | chr25:34732615-34732345 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 248, 265 |
| Conread position: | 573-841 |
| Cow position: | chr25:33144846-33145112 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 189, 161 |
| Conread position: | 591-814 |
| Cow position: | chr25:34733994-34733771 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.