Cow genome map

Conread name: Ss1.1-Pig3-SRG8004D12.3

Conread position: 383-800
Cow position: chr3:20194781-20195198 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 258
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 11

Conread position: 387-644
Cow position: chr3:62721842-62721585 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 249, 230

Conread position: 387-697
Cow position: chr3:68027071-68027381 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 387-814
Cow position: chr3:68045832-68046259 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 269
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 387-834
Cow position: chr3:62722178-62721729 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 231

Conread position: 387-835
Cow position: chr3:62742425-62742870 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 270
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 425, 213

Conread position: 402-665
Cow position: chr3:62743171-62743433 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 405-616
Cow position: chr3:68046102-68046313 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 405-622
Cow position: chr3:68027510-68027726 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 405-824
Cow position: chr3:68027173-68027594 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 260
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 46

Conread position: 405-835
Cow position: chr3:68027257-68027689 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 267
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 411, 0

Conread position: 407-870
Cow position: chr3:62722073-62721608 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 11

Conread position: 409-752
Cow position: chr3:62742696-62743033 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 225
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 186, 61

Conread position: 411-812
Cow position: chr3:62721986-62721585 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 418-698
Cow position: chr3:20194984-20195264 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 420-738
Cow position: chr3:62721893-62721575 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 420-778
Cow position: chr3:68027020-68027378 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 198

Conread position: 420-824
Cow position: chr3:68045781-68046187 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 29

Conread position: 420-834
Cow position: chr3:62722229-62721814 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 0

Conread position: 420-835
Cow position: chr3:68045613-68046030 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 30

Conread position: 421-701
Cow position: chr3:62742292-62742571 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 421-780
Cow position: chr3:62742375-62742731 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 231
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 213, 196

Conread position: 421-784
Cow position: chr3:62722312-62721949 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 423-794
Cow position: chr3:68045952-68046323 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 242
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 282, 311

Conread position: 428-699
Cow position: chr3:62743033-62743299 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 428-700
Cow position: chr3:68027448-68027720 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 126, 112

Conread position: 428-753
Cow position: chr3:68046041-68046364 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 210
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 191, 202

Conread position: 429-784
Cow position: chr3:20194743-20195098 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 211, 205

Conread position: 429-813
Cow position: chr3:20194911-20195295 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 236
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 202, 198

Conread position: 429-870
Cow position: chr3:68045706-68046150 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 406

Conread position: 430-812
Cow position: chr3:62722387-62722005 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 250
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 74, 49

Conread position: 430-814
Cow position: chr3:77351134-77350758 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 245
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 126, 30

Conread position: 434-749
Cow position: chr3:62743118-62743433 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 208
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 452-870
Cow position: chr3:68045561-68045982 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 270
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 16, 26

Conread position: 466-778
Cow position: chr3:68026983-68027294 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 520-828
Cow position: chr3:62722381-62722070 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 43

Conread position: 555-865
Cow position: chr3:20194785-20195098 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 168, 162

Show alignments to all cow chromosomes.