Cow genome map
Conread name: | Ss1.1-Pig3-SRG8004D12.3 |
Conread position: | 304-705 |
Cow position: | chr6:49429126-49429531 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 247 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 79, 73 |
Conread position: | 309-814 |
Cow position: | chr6:49396356-49396867 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 318 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 83, 68 |
Conread position: | 347-873 |
Cow position: | chr6:49428329-49428864 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 339 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 49, 32 |
Conread position: | 382-835 |
Cow position: | chr6:49340714-49341169 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 168 |
Conread position: | 384-794 |
Cow position: | chr6:49428288-49428699 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 260 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 20, 10 |
Conread position: | 385-802 |
Cow position: | chr6:49340549-49340966 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 165 |
Conread position: | 385-864 |
Cow position: | chr6:49340885-49341367 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 427, 0 |
Conread position: | 387-706 |
Cow position: | chr6:49341139-49341456 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 217 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 32, 24 |
Conread position: | 387-751 |
Cow position: | chr6:49341055-49341419 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 387-793 |
Cow position: | chr6:49396272-49396678 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 261 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 156, 165 |
Conread position: | 387-836 |
Cow position: | chr6:49340467-49340918 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 429, 0 |
Conread position: | 387-870 |
Cow position: | chr6:49340635-49341121 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 163 |
Conread position: | 387-870 |
Cow position: | chr6:49396356-49396842 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 302 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 159, 169 |
Conread position: | 397-812 |
Cow position: | chr6:49340981-49341396 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 319, 311 |
Conread position: | 401-812 |
Cow position: | chr6:49428221-49428632 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 271 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 199, 193 |
Conread position: | 403-784 |
Cow position: | chr6:49428641-49429024 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 232 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 405-799 |
Cow position: | chr6:49428897-49429291 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 249 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 228, 235 |
Conread position: | 406-835 |
Cow position: | chr6:49340821-49341253 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 48 |
Conread position: | 418-784 |
Cow position: | chr6:49428994-49429360 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 236 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 125, 138 |
Conread position: | 418-836 |
Cow position: | chr6:49428742-49429162 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 270 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 51, 41 |
Conread position: | 420-835 |
Cow position: | chr6:49340416-49340833 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 392, 0 |
Conread position: | 429-790 |
Cow position: | chr6:49428585-49428946 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 242 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 113, 123 |
Conread position: | 429-837 |
Cow position: | chr6:49428837-49429247 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 257 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 288, 295 |
Conread position: | 431-834 |
Cow position: | chr6:49396070-49396468 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 266 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 115, 125 |
Conread position: | 432-748 |
Cow position: | chr6:49429176-49429492 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 203 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 432-793 |
Cow position: | chr6:49428504-49428865 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 241 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 115, 123 |
Conread position: | 432-814 |
Cow position: | chr6:49396233-49396615 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 336, 330 |
Conread position: | 432-814 |
Cow position: | chr6:49396569-49396951 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 251 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 208, 185 |
Conread position: | 434-891 |
Cow position: | chr6:49395905-49396361 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 283 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 112, 127 |
Conread position: | 444-748 |
Cow position: | chr6:49396665-49396969 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 188 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 101, 111 |
Conread position: | 471-814 |
Cow position: | chr6:49429131-49429474 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 233 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 76, 85 |
Conread position: | 476-835 |
Cow position: | chr6:49340388-49340749 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 80 |
Conread position: | 489-780 |
Cow position: | chr6:49362336-49362627 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 185 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 150, 144 |
Conread position: | 533-873 |
Cow position: | chr6:49340361-49340704 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 230 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 283, 293 |
Show alignments to all cow chromosomes.