Cow genome map

Conread name: Ss1.1-Pig3-SRG8004D12.3

Conread position: 304-705
Cow position: chr6:49429126-49429531 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 247
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 79, 73

Conread position: 309-814
Cow position: chr6:49396356-49396867 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 318
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 83, 68

Conread position: 347-873
Cow position: chr6:49428329-49428864 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 339
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 49, 32

Conread position: 382-835
Cow position: chr6:49340714-49341169 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 168

Conread position: 384-794
Cow position: chr6:49428288-49428699 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 260
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 10

Conread position: 385-802
Cow position: chr6:49340549-49340966 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 165

Conread position: 385-864
Cow position: chr6:49340885-49341367 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 0

Conread position: 387-706
Cow position: chr6:49341139-49341456 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 32, 24

Conread position: 387-751
Cow position: chr6:49341055-49341419 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 387-793
Cow position: chr6:49396272-49396678 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 261
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 156, 165

Conread position: 387-836
Cow position: chr6:49340467-49340918 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 429, 0

Conread position: 387-870
Cow position: chr6:49340635-49341121 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 163

Conread position: 387-870
Cow position: chr6:49396356-49396842 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 302
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 159, 169

Conread position: 397-812
Cow position: chr6:49340981-49341396 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 311

Conread position: 401-812
Cow position: chr6:49428221-49428632 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 271
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 199, 193

Conread position: 403-784
Cow position: chr6:49428641-49429024 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 232
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 405-799
Cow position: chr6:49428897-49429291 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 249
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 228, 235

Conread position: 406-835
Cow position: chr6:49340821-49341253 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 48

Conread position: 418-784
Cow position: chr6:49428994-49429360 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 236
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 125, 138

Conread position: 418-836
Cow position: chr6:49428742-49429162 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 270
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 51, 41

Conread position: 420-835
Cow position: chr6:49340416-49340833 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 0

Conread position: 429-790
Cow position: chr6:49428585-49428946 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 242
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 113, 123

Conread position: 429-837
Cow position: chr6:49428837-49429247 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 257
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 288, 295

Conread position: 431-834
Cow position: chr6:49396070-49396468 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 266
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 115, 125

Conread position: 432-748
Cow position: chr6:49429176-49429492 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 203
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 432-793
Cow position: chr6:49428504-49428865 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 241
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 115, 123

Conread position: 432-814
Cow position: chr6:49396233-49396615 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 330

Conread position: 432-814
Cow position: chr6:49396569-49396951 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 251
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 208, 185

Conread position: 434-891
Cow position: chr6:49395905-49396361 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 283
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 112, 127

Conread position: 444-748
Cow position: chr6:49396665-49396969 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 188
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 101, 111

Conread position: 471-814
Cow position: chr6:49429131-49429474 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 233
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 76, 85

Conread position: 476-835
Cow position: chr6:49340388-49340749 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 80

Conread position: 489-780
Cow position: chr6:49362336-49362627 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 185
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 150, 144

Conread position: 533-873
Cow position: chr6:49340361-49340704 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 230
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 283, 293

Show alignments to all cow chromosomes.