Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8004D12.3
        

               Conread position:
               306-813
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 56
               

               Conread position:
               357-756
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               248
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               379-814
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               279
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               165, 9
               

               Conread position:
               381-751
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               89, 14
               

               Conread position:
               384-775
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               85, 71
               

               Conread position:
               384-778
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               86, 75
               

               Conread position:
               386-616
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               386-775
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-613
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               172, 156
               

               Conread position:
               387-620
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               169, 149
               

               Conread position:
               387-653
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-708
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-709
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               29, 37
               

               Conread position:
               387-740
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               284, 288
               

               Conread position:
               387-775
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               324, 337
               

               Conread position:
               387-778
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-780
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               148, 161
               

               Conread position:
               387-814
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-814
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               387-828
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 168
               

               Conread position:
               387-836
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               247, 72
               

               Conread position:
               387-836
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               427, 442
               

               Conread position:
               387-871
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               425, 0
               

               Conread position:
               387-901
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 169
               

               Conread position:
               391-691
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               224, 133
               

               Conread position:
               391-787
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               168, 143
               

               Conread position:
               398-778
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               21, 244
               

               Conread position:
               400-873
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               403-780
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               228, 89
               

               Conread position:
               403-823
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               275
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               16, 8
               

               Conread position:
               404-753
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               60, 135
               

               Conread position:
               405-701
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               138, 151
               

               Conread position:
               405-784
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               247
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               405-814
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               405-871
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               406, 465
               

               Conread position:
               406-787
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               245
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               11, 52
               

               Conread position:
               406-836
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               409-698
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               229, 208
               

               Conread position:
               409-778
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               10, 49
               

               Conread position:
               409-784
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               124, 139
               

               Conread position:
               409-824
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               61, 43
               

               Conread position:
               409-836
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               403, 416
               

               Conread position:
               409-839
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               403, 416
               

               Conread position:
               409-881
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               407, 0
               

               Conread position:
               410-824
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               419-801
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 38
               

               Conread position:
               420-787
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 31
               

               Conread position:
               420-828
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               37, 51
               

               Conread position:
               420-836
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               263
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               216, 197
               

               Conread position:
               420-870
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               77, 98
               

               Conread position:
               421-784
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               421-835
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 51
               

               Conread position:
               421-837
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               390, 0
               

               Conread position:
               421-887
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               280, 292
               

               Conread position:
               423-877
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               208, 204
               

               Conread position:
               428-824
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               374, 0
               

               Conread position:
               428-824
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               388, 0
               

               Conread position:
               428-835
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 36
               

               Conread position:
               429-623
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               429-788
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               20, 32
               

               Conread position:
               429-825
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 53
               

               Conread position:
               429-833
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               387, 0
               

               Conread position:
               430-745
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               119, 126
               

               Conread position:
               430-779
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               42, 27
               

               Conread position:
               430-780
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               431-697
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               431-710
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               431-835
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               381, 0
               

               Conread position:
               432-824
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               380, 0
               

               Conread position:
               432-835
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               377, 0
               

               Conread position:
               438-775
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               460-778
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               246, 242
               

               Conread position:
               463-814
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               231
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               463-836
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               353, 363
               

               Conread position:
               467-703
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               82, 89
               

               Conread position:
               474-775
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               240, 135
               

               Conread position:
               474-878
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               70, 80
               

               Conread position:
               476-822
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               336, 0
               

               Conread position:
               501-835
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               312, 0
               

               Conread position:
               520-833
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               555-784
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               557-775
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               136, 0
               
Show alignments to all cow chromosomes.