Cow genome map
Conread name: | Ss1.1-Pig3-SRG8004D12.3 |
Conread position: | 306-813 |
Cow position: | chr7:18390222-18390735 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 56 |
Conread position: | 357-756 |
Cow position: | chr7:28846450-28846855 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 248 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 45, 20 |
Conread position: | 379-814 |
Cow position: | chr7:1014743-1015177 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 279 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 165, 9 |
Conread position: | 381-751 |
Cow position: | chr7:8277991-8278359 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 228 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 89, 14 |
Conread position: | 384-775 |
Cow position: | chr7:8277656-8278047 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 246 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 85, 71 |
Conread position: | 384-778 |
Cow position: | chr7:8325381-8325775 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 238 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 86, 75 |
Conread position: | 386-616 |
Cow position: | chr7:11434509-11434279 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 150 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 386-775 |
Cow position: | chr7:11600873-11600484 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 387-613 |
Cow position: | chr7:1440037-1440263 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 156 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 172, 156 |
Conread position: | 387-620 |
Cow position: | chr7:8325888-8326121 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 162 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 169, 149 |
Conread position: | 387-653 |
Cow position: | chr7:11600704-11600438 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 170 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 387-708 |
Cow position: | chr7:18390477-18390798 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 205 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 387-709 |
Cow position: | chr7:1015170-1015494 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 212 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 29, 37 |
Conread position: | 387-740 |
Cow position: | chr7:42878625-42878272 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 234 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 284, 288 |
Conread position: | 387-775 |
Cow position: | chr7:1438312-1438700 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 231 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 324, 337 |
Conread position: | 387-778 |
Cow position: | chr7:42878877-42878486 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 387-780 |
Cow position: | chr7:8325636-8326029 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 250 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 148, 161 |
Conread position: | 387-814 |
Cow position: | chr7:42878961-42878534 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 387-814 |
Cow position: | chr7:42879045-42878618 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 32 |
Conread position: | 387-828 |
Cow position: | chr7:3180348-3180792 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 168 |
Conread position: | 387-836 |
Cow position: | chr7:1439787-1440235 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 277 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 247, 72 |
Conread position: | 387-836 |
Cow position: | chr7:42879129-42878679 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 427, 442 |
Conread position: | 387-871 |
Cow position: | chr7:42878793-42878306 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 425, 0 |
Conread position: | 387-901 |
Cow position: | chr7:3180264-3180779 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 169 |
Conread position: | 391-691 |
Cow position: | chr7:1439453-1439756 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 200 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 224, 133 |
Conread position: | 391-787 |
Cow position: | chr7:8325136-8325532 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 259 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 168, 143 |
Conread position: | 398-778 |
Cow position: | chr7:8325309-8325691 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 239 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 21, 244 |
Conread position: | 400-873 |
Cow position: | chr7:18390236-18390714 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 403-780 |
Cow position: | chr7:1439886-1440262 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 247 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 228, 89 |
Conread position: | 403-823 |
Cow position: | chr7:18390409-18390831 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 275 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 16, 8 |
Conread position: | 404-753 |
Cow position: | chr7:1439632-1439983 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 223 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 60, 135 |
Conread position: | 405-701 |
Cow position: | chr7:8243803-8244096 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 193 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 138, 151 |
Conread position: | 405-784 |
Cow position: | chr7:11601022-11600643 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 247 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 405-814 |
Cow position: | chr7:42878691-42878282 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 405-871 |
Cow position: | chr7:42879195-42878727 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 406, 465 |
Conread position: | 406-787 |
Cow position: | chr7:8324730-8325112 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 245 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 11, 52 |
Conread position: | 406-836 |
Cow position: | chr7:1014852-1015285 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 409-698 |
Cow position: | chr7:3180538-3180825 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 202 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 229, 208 |
Conread position: | 409-778 |
Cow position: | chr7:8324816-8325187 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 240 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 10, 49 |
Conread position: | 409-784 |
Cow position: | chr7:8243052-8243426 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 243 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 124, 139 |
Conread position: | 409-824 |
Cow position: | chr7:8325574-8325991 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 258 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 61, 43 |
Conread position: | 409-836 |
Cow position: | chr7:3180118-3180546 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 403, 416 |
Conread position: | 409-839 |
Cow position: | chr7:12293517-12293948 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 254 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 403, 416 |
Conread position: | 409-881 |
Cow position: | chr7:3179866-3180341 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 407, 0 |
Conread position: | 410-824 |
Cow position: | chr7:1014525-1014937 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 270 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 9, 101 |
Conread position: | 419-801 |
Cow position: | chr7:8278195-8278574 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 239 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 53, 38 |
Conread position: | 420-787 |
Cow position: | chr7:8243650-8244015 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 226 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 44, 31 |
Conread position: | 420-828 |
Cow position: | chr7:42879432-42879021 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 252 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 37, 51 |
Conread position: | 420-836 |
Cow position: | chr7:11601175-11600758 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 263 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 216, 197 |
Conread position: | 420-870 |
Cow position: | chr7:18390006-18390459 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 289 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 77, 98 |
Conread position: | 421-784 |
Cow position: | chr7:8277861-8278224 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 240 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 43, 31 |
Conread position: | 421-835 |
Cow position: | chr7:3179962-3180378 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 51 |
Conread position: | 421-837 |
Cow position: | chr7:1015036-1015454 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 390, 0 |
Conread position: | 421-887 |
Cow position: | chr7:1014370-1014833 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 288 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 280, 292 |
Conread position: | 423-877 |
Cow position: | chr7:12293279-12293736 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 272 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 208, 204 |
Conread position: | 428-824 |
Cow position: | chr7:3180053-3180451 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 374, 0 |
Conread position: | 428-824 |
Cow position: | chr7:3180221-3180619 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 388, 0 |
Conread position: | 428-835 |
Cow position: | chr7:1014959-1015368 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 36 |
Conread position: | 429-623 |
Cow position: | chr7:8277281-8277475 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 137 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 40, 28 |
Conread position: | 429-788 |
Cow position: | chr7:8325762-8326121 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 245 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 20, 32 |
Conread position: | 429-825 |
Cow position: | chr7:3180474-3180871 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 53 |
Conread position: | 429-833 |
Cow position: | chr7:1014708-1015115 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 387, 0 |
Conread position: | 430-745 |
Cow position: | chr7:8278122-8278436 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 201 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 119, 126 |
Conread position: | 430-779 |
Cow position: | chr7:8277954-8278303 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 240 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 42, 27 |
Conread position: | 430-780 |
Cow position: | chr7:8243408-8243758 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 218 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 35, 19 |
Conread position: | 431-697 |
Cow position: | chr7:1014296-1014562 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 181 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 431-710 |
Cow position: | chr7:28846698-28846977 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 173 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 431-835 |
Cow position: | chr7:42879253-42878847 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 381, 0 |
Conread position: | 432-824 |
Cow position: | chr7:3179721-3180115 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 380, 0 |
Conread position: | 432-835 |
Cow position: | chr7:11601079-11600674 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 377, 0 |
Conread position: | 438-775 |
Cow position: | chr7:1438279-1438616 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 205 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 460-778 |
Cow position: | chr7:11600883-11600565 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 219 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 246, 242 |
Conread position: | 463-814 |
Cow position: | chr7:18390133-18390484 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 231 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 463-836 |
Cow position: | chr7:42879305-42878931 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 241 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 353, 363 |
Conread position: | 467-703 |
Cow position: | chr7:11434512-11434276 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 159 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 82, 89 |
Conread position: | 474-775 |
Cow position: | chr7:1439452-1439756 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 205 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 240, 135 |
Conread position: | 474-878 |
Cow position: | chr7:1014669-1015076 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 262 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 70, 80 |
Conread position: | 476-822 |
Cow position: | chr7:1014257-1014605 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 217 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 336, 0 |
Conread position: | 501-835 |
Cow position: | chr7:3179706-3180042 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 216 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 312, 0 |
Conread position: | 520-833 |
Cow position: | chr7:3179638-3179957 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 208 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 555-784 |
Cow position: | chr7:11434508-11434279 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 155 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 72, 85 |
Conread position: | 557-775 |
Cow position: | chr7:1439451-1439667 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 145 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 136, 0 |
Show alignments to all cow chromosomes.