Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8004D12.3 |
| Conread position: | 306-775 |
| Cow position: | chr8:48406982-48406507 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 256 |
| Conread position: | 307-861 |
| Cow position: | chr8:55580883-55581446 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 316 |
| Conread position: | 309-834 |
| Cow position: | chr8:48407399-48406866 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 248 |
| Conread position: | 379-813 |
| Cow position: | chr8:46816856-46817290 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 159 |
| Conread position: | 384-835 |
| Cow position: | chr8:46816189-46816642 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 428, 0 |
| Conread position: | 384-835 |
| Cow position: | chr8:46816693-46817146 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 279 |
| Conread position: | 386-814 |
| Cow position: | chr8:48407652-48407224 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 271 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-837 |
| Cow position: | chr8:46815849-46816308 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 289 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 387-607 |
| Cow position: | chr8:45201753-45201973 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-645 |
| Cow position: | chr8:46817116-46817374 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-699 |
| Cow position: | chr8:55581389-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-753 |
| Cow position: | chr8:48407147-48406781 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 243, 231 |
| Conread position: | 387-800 |
| Cow position: | chr8:48407483-48407070 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 387-814 |
| Cow position: | chr8:45201333-45201760 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 387-814 |
| Cow position: | chr8:48407231-48406804 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 271 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 287, 276 |
| Conread position: | 387-828 |
| Cow position: | chr8:45201501-45201944 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 381, 375 |
| Conread position: | 387-828 |
| Cow position: | chr8:55580885-55581329 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 230 |
| Conread position: | 387-830 |
| Cow position: | chr8:46816528-46816974 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 427, 0 |
| Conread position: | 387-831 |
| Cow position: | chr8:55581221-55581666 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 417, 439 |
| Conread position: | 387-835 |
| Cow position: | chr8:46816024-46816474 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 425, 0 |
| Conread position: | 387-836 |
| Cow position: | chr8:46816108-46816558 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 387-836 |
| Cow position: | chr8:46816276-46816726 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 429, 439 |
| Conread position: | 387-836 |
| Cow position: | chr8:46816780-46817230 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 426, 438 |
| Conread position: | 387-871 |
| Cow position: | chr8:45201081-45201568 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 421, 413 |
| Conread position: | 387-871 |
| Cow position: | chr8:45201165-45201652 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 415 |
| Conread position: | 387-871 |
| Cow position: | chr8:45201417-45201904 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 306 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 420, 409 |
| Conread position: | 397-753 |
| Cow position: | chr8:48406716-48406361 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 403-697 |
| Cow position: | chr8:46817048-46817342 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 69, 59 |
| Conread position: | 403-835 |
| Cow position: | chr8:45201265-45201699 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 405, 399 |
| Conread position: | 404-833 |
| Cow position: | chr8:46815957-46816389 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 128 |
| Conread position: | 409-789 |
| Cow position: | chr8:46816968-46817350 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 409-834 |
| Cow position: | chr8:48407545-48407117 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 407, 0 |
| Conread position: | 420-871 |
| Cow position: | chr8:45201030-45201484 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 121 |
| Conread position: | 421-814 |
| Cow position: | chr8:45200779-45201172 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 421-835 |
| Cow position: | chr8:46816478-46816894 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 393, 0 |
| Conread position: | 423-836 |
| Cow position: | chr8:46816648-46817062 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 133 |
| Conread position: | 428-704 |
| Cow position: | chr8:48406602-48406326 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 428-800 |
| Cow position: | chr8:46816401-46816773 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 429-655 |
| Cow position: | chr8:55581515-55581741 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 432-794 |
| Cow position: | chr8:55581182-55581544 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-830 |
| Cow position: | chr8:48407325-48406953 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 0 |
| Conread position: | 462-814 |
| Cow position: | chr8:48406736-48406384 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 465-814 |
| Cow position: | chr8:48407657-48407308 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 471-810 |
| Cow position: | chr8:55581389-55581728 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 250, 239 |
| Conread position: | 472-873 |
| Cow position: | chr8:55580802-55581206 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 494-836 |
| Cow position: | chr8:45200936-45201280 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 209, 215 |
| Conread position: | 513-697 |
| Cow position: | chr8:6958059-6957875 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 32, 37 |
Show alignments to all cow chromosomes.