Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8004D12.3
        

               Conread position:
               309-784
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               311
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               60, 245
               

               Conread position:
               379-772
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               165, 179
               

               Conread position:
               379-828
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               433, 0
               

               Conread position:
               384-835
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 234
               

               Conread position:
               386-813
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-591
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-592
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-613
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-669
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-748
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               236
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-748
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-775
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-775
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 243
               

               Conread position:
               387-780
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 151
               

               Conread position:
               387-780
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 146
               

               Conread position:
               387-811
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               420, 31
               

               Conread position:
               387-813
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 168
               

               Conread position:
               387-828
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 228
               

               Conread position:
               387-830
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               427, 0
               

               Conread position:
               387-835
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               399, 406
               

               Conread position:
               387-836
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 163
               

               Conread position:
               391-664
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               227, 239
               

               Conread position:
               400-812
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               12, 347
               

               Conread position:
               403-769
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 69
               

               Conread position:
               403-775
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-783
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               333, 328
               

               Conread position:
               403-783
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               246
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               405-697
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               229, 212
               

               Conread position:
               409-784
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 211
               

               Conread position:
               409-813
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               339, 351
               

               Conread position:
               409-871
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               298
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               12, 352
               

               Conread position:
               420-833
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               263
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               35, 53
               

               Conread position:
               428-778
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               428-795
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               99, 121
               

               Conread position:
               428-836
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               429-873
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               265
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               293, 273
               

               Conread position:
               432-778
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-793
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               94, 117
               

               Conread position:
               438-740
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               462-799
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               92, 70
               

               Conread position:
               470-828
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               339, 0
               

               Conread position:
               471-780
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               208
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               471-799
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               160, 155
               

               Conread position:
               471-814
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               334, 326
               

               Conread position:
               482-812
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               495-791
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               289, 0
               

               Conread position:
               495-835
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               5, 47
               

               Conread position:
               521-834
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               302, 0
               
Show alignments to all cow chromosomes.