Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8006F01.3 |
| Conread position: | 13-175 |
| Cow position: | chr1:81648096-81648262 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 14-196 |
| Cow position: | chr1:55114251-55114069 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 41, 169 |
| Conread position: | 21-175 |
| Cow position: | chr1:6319142-6319296 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 26-175 |
| Cow position: | chr1:70661918-70662068 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 26-175 |
| Cow position: | chr1:87115282-87115132 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 27-284 |
| Cow position: | chr1:46201819-46202076 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 28, 83 |
| Conread position: | 33-175 |
| Cow position: | chr1:27940299-27940157 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 73-245 |
| Cow position: | chr1:90041434-90041608 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 80-281 |
| Cow position: | chr1:42050458-42050661 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 146, 24 |
| Conread position: | 578-796 |
| Cow position: | chr1:32754501-32754285 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 8 |
| Conread position: | 580-846 |
| Cow position: | chr1:84945452-84945190 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 589-872 |
| Cow position: | chr1:64038613-64038332 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 606-866 |
| Cow position: | chr1:55125179-55125434 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 632-850 |
| Cow position: | chr1:86537571-86537351 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 638-845 |
| Cow position: | chr1:70664374-70664585 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 157 |
| Conread position: | 716-845 |
| Cow position: | chr1:68025691-68025561 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 37, 63 |
Show alignments to all cow chromosomes.