Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8006F01.3
        

               Conread position:
               13-175
               

               Cow position:
               chr13:16571918-16571759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               36-287
               

               Cow position:
               chr13:5233478-5233736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               19, 84
               

               Conread position:
               54-168
               

               Cow position:
               chr13:44984914-44985028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               54-212
               

               Cow position:
               chr13:19250611-19250768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               102-287
               

               Cow position:
               chr13:43498719-43498531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               153, 59
               

               Conread position:
               574-850
               

               Cow position:
               chr13:18545393-18545665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               86, 20
               

               Conread position:
               580-849
               

               Cow position:
               chr13:50371537-50371800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               720-845
               

               Cow position:
               chr13:48916324-48916197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               33, 0
               
Show alignments to all cow chromosomes.